Information for 8-GAGGCAGGCTGGTCTT (Motif 25)

A C T G C G T A A C T G A C T G A T G C C G T A C T A G A T C G A G T C A C G T A C T G A C T G A C G T A G T C G C A T A G C T
Reverse Opposite:
C T G A C G T A T A C G C G T A A G T C A G T C C G T A A C T G A T G C A G T C A C G T A T C G A G T C A G T C A C G T A G T C
p-value:1e-8
log p-value:-1.937e+01
Information Content per bp:1.918
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.8 +/- 25.8bp
Average Position of motif in Background49.4 +/- 14.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:1
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GAGGCAGGCTGGTCTT---
--NNANTGGTGGTCTTNNN
 A C T G C G T A A C T G A C T G A T G C C G T A C T A G A T C G A G T C A C G T A C T G A C T G A C G T A G T C G C A T A G C T A C G T A C G T A C G T
A C G T A C G T T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

GLI2/MA0734.1/Jaspar

Match Rank:2
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GAGGCAGGCTGGTCTT
----CAGTGTGGTCGC
 A C T G C G T A A C T G A C T G A T G C C G T A C T A G A T C G A G T C A C G T A C T G A C T G A C G T A G T C G C A T A G C T
A C G T A C G T A C G T A C G T G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.50
Offset:4
Orientation:forward strand
Alignment:GAGGCAGGCTGGTCTT
----TWGTCTGV----
 A C T G C G T A A C T G A C T G A T G C C G T A C T A G A T C G A G T C A C G T A C T G A C T G A C G T A G T C G C A T A G C T
A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:4
Score:0.49
Offset:3
Orientation:forward strand
Alignment:GAGGCAGGCTGGTCTT
---CGTGGGTGGTCC-
 A C T G C G T A A C T G A C T G A T G C C G T A C T A G A T C G A G T C A C G T A C T G A C T G A C G T A G T C G C A T A G C T
A C G T A C G T A C G T A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:5
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GAGGCAGGCTGGTCTT
SCAGYCADGCATGAC--
 A C G T A C T G C G T A A C T G A C T G A T G C C G T A C T A G A T C G A G T C A C G T A C T G A C T G A C G T A G T C G C A T A G C T
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.48
Offset:4
Orientation:forward strand
Alignment:GAGGCAGGCTGGTCTT
----AAGGCAAGTGT-
 A C T G C G T A A C T G A C T G A T G C C G T A C T A G A T C G A G T C A C G T A C T G A C T G A C G T A G T C G C A T A G C T
A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:7
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:GAGGCAGGCTGGTCTT
-GGNGCGNCTGTTNNN
 A C T G C G T A A C T G A C T G A T G C C G T A C T A G A T C G A G T C A C G T A C T G A C T G A C G T A G T C G C A T A G C T
A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

SP2/MA0516.1/Jaspar

Match Rank:8
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-GAGGCAGGCTGGTCTT
GGGNGGGGGCGGGGC--
 A C G T A C T G C G T A A C T G A C T G A T G C C G T A C T A G A T C G A G T C A C G T A C T G A C T G A C G T A G T C G C A T A G C T
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.47
Offset:-2
Orientation:reverse strand
Alignment:--GAGGCAGGCTGGTCTT
AGGTGNCAGACAG-----
 A C G T A C G T A C T G C G T A A C T G A C T G A T G C C G T A C T A G A T C G A G T C A C G T A C T G A C T G A C G T A G T C G C A T A G C T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:10
Score:0.47
Offset:-5
Orientation:forward strand
Alignment:-----GAGGCAGGCTGGTCTT
AAGGKGRCGCAGGCA------
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C T G A T G C C G T A C T A G A T C G A G T C A C G T A C T G A C T G A C G T A G T C G C A T A G C T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T A C G T A C G T A C G T A C G T A C G T