Information for 22-GGCAGAACAAAGC (Motif 22)

A C T G C T A G A T G C C G T A C T A G C T G A C G T A G T A C C G T A G T C A C G T A A C T G T G A C
Reverse Opposite:
A C T G A G T C A C G T A C G T C G A T A C T G C G A T A G C T G A T C G A C T A T C G A G T C G T A C
p-value:1e-9
log p-value:-2.225e+01
Information Content per bp:1.800
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif20.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets40.7 +/- 20.8bp
Average Position of motif in Background49.7 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.80
Offset:3
Orientation:reverse strand
Alignment:GGCAGAACAAAGC
---GGAACAAAGR
 A C T G C T A G A T G C C G T A C T A G C T G A C G T A G T A C C G T A G T C A C G T A A C T G T G A C
A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.76
Offset:3
Orientation:reverse strand
Alignment:GGCAGAACAAAGC
---AAAACAAAGG
 A C T G C T A G A T G C C G T A C T A G C T G A C G T A G T A C C G T A G T C A C G T A A C T G T G A C
A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

PB0071.1_Sox4_1/Jaspar

Match Rank:3
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GGCAGAACAAAGC----
AGAAGAACAAAGGACTA
 A C T G C T A G A T G C C G T A C T A G C T G A C G T A G T A C C G T A G T C A C G T A A C T G T G A C A C G T A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0061.1_Sox11_1/Jaspar

Match Rank:4
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GGCAGAACAAAGC----
ATAAGAACAAAGGACTA
 A C T G C T A G A T G C C G T A C T A G C T G A C G T A G T A C C G T A G T C A C G T A A C T G T G A C A C G T A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:GGCAGAACAAAGC
---VRRACAAWGG
 A C T G C T A G A T G C C G T A C T A G C T G A C G T A G T A C C G T A G T C A C G T A A C T G T G A C
A C G T A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

Sox6/MA0515.1/Jaspar

Match Rank:6
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:GGCAGAACAAAGC
---AAAACAATGG
 A C T G C T A G A T G C C G T A C T A G C T G A C G T A G T A C C G T A G T C A C G T A A C T G T G A C
A C G T A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G

SOX10/MA0442.1/Jaspar

Match Rank:7
Score:0.69
Offset:6
Orientation:reverse strand
Alignment:GGCAGAACAAAGC
------ACAAAG-
 A C T G C T A G A T G C C G T A C T A G C T G A C G T A G T A C C G T A G T C A C G T A A C T G T G A C
A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:8
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GGCAGAACAAAGC-
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A C T G C T A G A T G C C G T A C T A G C T G A C G T A G T A C C G T A G T C A C G T A A C T G T G A C A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:GGCAGAACAAAGC-
----GAACAATGGN
 A C T G C T A G A T G C C G T A C T A G C T G A C G T A G T A C C G T A G T C A C G T A A C T G T G A C A C G T
A C G T A C G T A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:GGCAGAACAAAGC
---RNAACAATGG
 A C T G C T A G A T G C C G T A C T A G C T G A C G T A G T A C C G T A G T C A C G T A A C T G T G A C
A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G