Information for 18-GTCAATTATC (Motif 21)

T C A G C G A T A T G C C G T A G T C A A C G T C A G T T C G A G A C T T G A C
Reverse Opposite:
A C T G C T G A A G C T G T C A G T C A C A G T A C G T T A C G G C T A A G T C
p-value:1e-9
log p-value:-2.245e+01
Information Content per bp:1.692
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.24%
Number of Background Sequences with motif349.8
Percentage of Background Sequences with motif0.74%
Average Position of motif in Targets47.9 +/- 28.9bp
Average Position of motif in Background50.1 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HESX1/MA0894.1/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:GTCAATTATC
NCCAATTANC
 T C A G C G A T A T G C C G T A G T C A A C G T C A G T T C G A G A C T T G A C
C T A G A G T C G A T C C T G A G T C A A G C T G A C T G C T A C T A G A G T C

RAX/MA0718.1/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GTCAATTATC
GCCAATTAAC
 T C A G C G A T A T G C C G T A G T C A A C G T C A G T T C G A G A C T T G A C
T C A G A G T C G A T C G C T A G T C A C G A T G A C T C G T A C T G A G A T C

ESX1/MA0644.1/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GTCAATTATC
ACCAATTAAC
 T C A G C G A T A T G C C G T A G T C A A C G T C A G T T C G A G A C T T G A C
T C G A G A T C G A T C T C G A G T C A G A C T G A C T G C T A T C G A G T A C

EN2/MA0642.1/Jaspar

Match Rank:4
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GTCAATTATC
CCCAATTAGC
 T C A G C G A T A T G C C G T A G T C A A C G T C A G T T C G A G A C T T G A C
T A G C A T G C A G T C T G C A T G C A A C G T A G C T C T G A T A C G A T G C

Dlx2/MA0885.1/Jaspar

Match Rank:5
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GTCAATTATC
-GCAATTAA-
 T C A G C G A T A T G C C G T A G T C A A C G T C A G T T C G A G A C T T G A C
A C G T T A C G G A T C G T C A G T C A A C G T A C G T C G T A G C T A A C G T

PH0024.1_Dlx5/Jaspar

Match Rank:6
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----GTCAATTATC--
NANNGNTAATTACCNN
 A C G T A C G T A C G T A C G T T C A G C G A T A T G C C G T A G T C A A C G T C A G T T C G A G A C T T G A C A C G T A C G T
A T G C T C G A A C T G T G C A T C A G A T G C G A C T G T C A C G T A G A C T C A G T C T G A A G T C A G T C A T G C T A G C

GBX2/MA0890.1/Jaspar

Match Rank:7
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GTCAATTATC
ACCAATTAGC
 T C A G C G A T A T G C C G T A G T C A A C G T C A G T T C G A G A C T T G A C
T C G A A T G C G A T C T C G A T G C A A C G T A C G T G C T A T C A G A T G C

Prrx2/MA0075.2/Jaspar

Match Rank:8
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GTCAATTATC
-CCAATTAA-
 T C A G C G A T A T G C C G T A G T C A A C G T C A G T T C G A G A C T T G A C
A C G T A G T C G A T C T C G A T G C A G A C T G A C T G C T A T C G A A C G T

LBX2/MA0699.1/Jaspar

Match Rank:9
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GTCAATTATC
GCCAATTAGC
 T C A G C G A T A T G C C G T A G T C A A C G T C A G T T C G A G A C T T G A C
T C A G A G T C G A T C T G C A T G C A A C G T A C G T C G T A C T A G T A G C

Dlx3/MA0880.1/Jaspar

Match Rank:10
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GTCAATTATC
-CCAATTAC-
 T C A G C G A T A T G C C G T A G T C A A C G T C A G T T C G A G A C T T G A C
A C G T T A G C G A T C G T C A G T C A G C A T A G C T G C T A G T A C A C G T