p-value: | 1e-10 |
log p-value: | -2.396e+01 |
Information Content per bp: | 1.848 |
Number of Target Sequences with motif | 12.0 |
Percentage of Target Sequences with motif | 1.39% |
Number of Background Sequences with motif | 42.4 |
Percentage of Background Sequences with motif | 0.09% |
Average Position of motif in Targets | 48.1 +/- 34.5bp |
Average Position of motif in Background | 47.5 +/- 34.4bp |
Strand Bias (log2 ratio + to - strand density) | -1.4 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer
Match Rank: | 1 |
Score: | 0.83 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GGCCTAATTA --NCTAATTA |
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VSX2/MA0726.1/Jaspar
Match Rank: | 2 |
Score: | 0.83 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GGCCTAATTA- ---CTAATTAG |
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LHX2/MA0700.1/Jaspar
Match Rank: | 3 |
Score: | 0.82 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GGCCTAATTA-- --ACTAATTAAC |
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EMX2/MA0886.1/Jaspar
Match Rank: | 4 |
Score: | 0.82 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GGCCTAATTA-- --NCTAATTANN |
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VSX1/MA0725.1/Jaspar
Match Rank: | 5 |
Score: | 0.81 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GGCCTAATTA- ---CTAATTAT |
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MEOX1/MA0661.1/Jaspar
Match Rank: | 6 |
Score: | 0.80 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GGCCTAATTA-- --GCTAATTAAC |
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LBX1/MA0618.1/Jaspar
Match Rank: | 7 |
Score: | 0.80 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GGCCTAATTA- ---CTAATTAA |
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mix-a/MA0621.1/Jaspar
Match Rank: | 8 |
Score: | 0.80 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GGCCTAATTA--- --NCTAATTAANN |
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NOTO/MA0710.1/Jaspar
Match Rank: | 9 |
Score: | 0.80 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GGCCTAATTA-- --GCTAATTAGC |
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Lhx8/MA0705.1/Jaspar
Match Rank: | 10 |
Score: | 0.80 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GGCCTAATTA- ---CTAATTAG |
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