Information for 3-CCACAGGGGG (Motif 2)

A G T C G T A C T C G A A G T C C T G A A C T G A C T G A C T G T A C G A C T G
Reverse Opposite:
T G A C A T G C A G T C A G T C A G T C A G C T A C T G A G C T A C T G C T A G
p-value:1e-35
log p-value:-8.244e+01
Information Content per bp:1.877
Number of Target Sequences with motif68.0
Percentage of Target Sequences with motif7.86%
Number of Background Sequences with motif502.6
Percentage of Background Sequences with motif1.06%
Average Position of motif in Targets49.4 +/- 20.8bp
Average Position of motif in Background49.8 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--CCACAGGGGG
GTCCCCAGGGGA
 A C G T A C G T A G T C G T A C T C G A A G T C C T G A A C T G A C T G A C T G T A C G A C T G
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

ZIC4/MA0751.1/Jaspar

Match Rank:2
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---CCACAGGGGG--
NCNCAGCGGGGGGTC
 A C G T A C G T A C G T A G T C G T A C T C G A A G T C C T G A A C T G A C T G A C T G T A C G A C T G A C G T A C G T
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

PB0102.1_Zic2_1/Jaspar

Match Rank:3
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---CCACAGGGGG--
ACCCCCCCGGGGGGN
 A C G T A C G T A C G T A G T C G T A C T C G A A G T C C T G A A C T G A C T G A C T G T A C G A C T G A C G T A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

PB0103.1_Zic3_1/Jaspar

Match Rank:4
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---CCACAGGGGG--
NCCCCCCCGGGGGGN
 A C G T A C G T A C G T A G T C G T A C T C G A A G T C C T G A A C T G A C T G A C T G T A C G A C T G A C G T A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0101.1_Zic1_1/Jaspar

Match Rank:5
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CCACAGGGGG--
CCCCCCCGGGGGNN
 A C G T A C G T A G T C G T A C T C G A A G T C C T G A A C T G A C T G A C T G T A C G A C T G A C G T A C G T
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

ZIC1/MA0696.1/Jaspar

Match Rank:6
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CCACAGGGGG--
CACAGCGGGGGGTC
 A C G T A C G T A G T C G T A C T C G A A G T C C T G A A C T G A C T G A C T G T A C G A C T G A C G T A C G T
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

ZIC3/MA0697.1/Jaspar

Match Rank:7
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CCACAGGGGG--
NCGCAGCGGGGGGTC
 A C G T A C G T A C G T A G T C G T A C T C G A A G T C C T G A A C T G A C T G A C T G T A C G A C T G A C G T A C G T
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CCACAGGGGG
AAACCACAGAN--
 A C G T A C G T A C G T A G T C G T A C T C G A A G T C C T G A A C T G A C T G A C T G T A C G A C T G
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CCACAGGGGG
-CACAGN---
 A G T C G T A C T C G A A G T C C T G A A C T G A C T G A C T G T A C G A C T G
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:10
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CCACAGGGGG--
GAGCAACAGGTGGTT
 A C G T A C G T A C G T A G T C G T A C T C G A A G T C C T G A A C T G A C T G A C T G T A C G A C T G A C G T A C G T
T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T