Information for 7-CGCCACWACGCATGCG (Motif 20)

A G T C T C A G A G T C A T G C C T G A A G T C C G A T T G C A G T A C A C T G A G T C G T C A C G A T A C T G G T A C A C T G
Reverse Opposite:
A G T C A C T G A G T C G C T A A C G T C T A G T A G C A C T G A C G T C G T A A C T G A G C T A T C G A C T G A G T C C T A G
p-value:1e-9
log p-value:-2.128e+01
Information Content per bp:1.744
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif6.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets66.2 +/- 27.6bp
Average Position of motif in Background45.0 +/- 5.1bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CGCCACWACGCATGCG-
-----CTGCGCATGCGC
 A G T C T C A G A G T C A T G C C T G A A G T C C G A T T G C A G T A C A C T G A G T C G T C A C G A T A C T G G T A C A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C

NRF(NRF)/Promoter/Homer

Match Rank:2
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CGCCACWACGCATGCG-
-----GTGCGCATGCGC
 A G T C T C A G A G T C A T G C C T G A A G T C C G A T T G C A G T A C A C T G A G T C G T C A C G A T A C T G G T A C A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C

NRF1/MA0506.1/Jaspar

Match Rank:3
Score:0.55
Offset:7
Orientation:forward strand
Alignment:CGCCACWACGCATGCG--
-------GCGCCTGCGCA
 A G T C T C A G A G T C A T G C C T G A A G T C C G A T T G C A G T A C A C T G A G T C G T C A C G A T A C T G G T A C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CGCCACWACGCATGCG-
--CCACACAGCAGGAGA
 A G T C T C A G A G T C A T G C C T G A A G T C C G A T T G C A G T A C A C T G A G T C G T C A C G A T A C T G G T A C A C T G A C G T
A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CGCCACWACGCATGCG-
--CCACACAGCAGGAGA
 A G T C T C A G A G T C A T G C C T G A A G T C C G A T T G C A G T A C A C T G A G T C G T C A C G A T A C T G G T A C A C T G A C G T
A C G T A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CGCCACWACGCATGCG
NWAACCACADNN------
 A C G T A C G T A G T C T C A G A G T C A T G C C T G A A G T C C G A T T G C A G T A C A C T G A G T C G T C A C G A T A C T G G T A C A C T G
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:7
Score:0.49
Offset:0
Orientation:forward strand
Alignment:CGCCACWACGCATGCG
ATCCAC----------
 A G T C T C A G A G T C A T G C C T G A A G T C C G A T T G C A G T A C A C T G A G T C G T C A C G A T A C T G G T A C A C T G
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pax6/MA0069.1/Jaspar

Match Rank:8
Score:0.48
Offset:6
Orientation:reverse strand
Alignment:CGCCACWACGCATGCG----
------AANTCATGCGTGAA
 A G T C T C A G A G T C A T G C C T G A A G T C C G A T T G C A G T A C A C T G A G T C G T C A C G A T A C T G G T A C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A T C G A A G T C G A C T A T G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A T C G A

SP3/MA0746.1/Jaspar

Match Rank:9
Score:0.46
Offset:1
Orientation:forward strand
Alignment:CGCCACWACGCATGCG
-GCCACGCCCCC----
 A G T C T C A G A G T C A T G C C T G A A G T C C G A T T G C A G T A C A C T G A G T C G T C A C G A T A C T G G T A C A C T G
A C G T T A C G G T A C G T A C T G C A G A T C C T A G G T A C G T A C A G T C G T A C G A T C A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.46
Offset:-1
Orientation:reverse strand
Alignment:-CGCCACWACGCATGCG
AAACCACAGC-------
 A C G T A G T C T C A G A G T C A T G C C T G A A G T C C G A T T G C A G T A C A C T G A G T C G T C A C G A T A C T G G T A C A C T G
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T