Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-89 | -2.050e+02 | 0.0000 | 111.0 | 14.88% | 491.4 | 1.02% | motif file (matrix) |
svg |
2 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-40 | -9.401e+01 | 0.0000 | 129.0 | 17.29% | 2042.9 | 4.24% | motif file (matrix) |
svg |
3 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-38 | -8.919e+01 | 0.0000 | 131.0 | 17.56% | 2206.9 | 4.58% | motif file (matrix) |
svg |
4 |
| Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-36 | -8.500e+01 | 0.0000 | 101.0 | 13.54% | 1376.2 | 2.86% | motif file (matrix) |
svg |
5 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-36 | -8.431e+01 | 0.0000 | 198.0 | 26.54% | 4844.3 | 10.05% | motif file (matrix) |
svg |
6 |
| Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer | 1e-31 | -7.359e+01 | 0.0000 | 85.0 | 11.39% | 1120.1 | 2.32% | motif file (matrix) |
svg |
7 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-29 | -6.773e+01 | 0.0000 | 88.0 | 11.80% | 1307.8 | 2.71% | motif file (matrix) |
svg |
8 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-28 | -6.541e+01 | 0.0000 | 77.0 | 10.32% | 1034.8 | 2.15% | motif file (matrix) |
svg |
9 |
| Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer | 1e-28 | -6.540e+01 | 0.0000 | 69.0 | 9.25% | 822.3 | 1.71% | motif file (matrix) |
svg |
10 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-27 | -6.387e+01 | 0.0000 | 73.0 | 9.79% | 950.4 | 1.97% | motif file (matrix) |
svg |
11 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-25 | -5.816e+01 | 0.0000 | 91.0 | 12.20% | 1600.6 | 3.32% | motif file (matrix) |
svg |
12 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-24 | -5.629e+01 | 0.0000 | 162.0 | 21.72% | 4396.4 | 9.12% | motif file (matrix) |
svg |
13 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-23 | -5.384e+01 | 0.0000 | 167.0 | 22.39% | 4723.0 | 9.80% | motif file (matrix) |
svg |
14 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-22 | -5.271e+01 | 0.0000 | 109.0 | 14.61% | 2380.2 | 4.94% | motif file (matrix) |
svg |
15 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-20 | -4.741e+01 | 0.0000 | 117.0 | 15.68% | 2871.0 | 5.96% | motif file (matrix) |
svg |
16 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-20 | -4.652e+01 | 0.0000 | 98.0 | 13.14% | 2163.8 | 4.49% | motif file (matrix) |
svg |
17 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-19 | -4.544e+01 | 0.0000 | 91.0 | 12.20% | 1937.8 | 4.02% | motif file (matrix) |
svg |
18 |
| Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer | 1e-15 | -3.561e+01 | 0.0000 | 52.0 | 6.97% | 864.5 | 1.79% | motif file (matrix) |
svg |
19 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-9 | -2.149e+01 | 0.0000 | 68.0 | 9.12% | 1921.4 | 3.99% | motif file (matrix) |
svg |
20 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-8 | -1.983e+01 | 0.0000 | 67.0 | 8.98% | 1959.4 | 4.07% | motif file (matrix) |
svg |
21 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-7 | -1.841e+01 | 0.0000 | 93.0 | 12.47% | 3237.7 | 6.72% | motif file (matrix) |
svg |
22 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-7 | -1.617e+01 | 0.0000 | 76.0 | 10.19% | 2578.5 | 5.35% | motif file (matrix) |
svg |
23 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-6 | -1.400e+01 | 0.0000 | 31.0 | 4.16% | 732.5 | 1.52% | motif file (matrix) |
svg |
24 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-5 | -1.375e+01 | 0.0000 | 74.0 | 9.92% | 2652.0 | 5.50% | motif file (matrix) |
svg |
25 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-4 | -1.032e+01 | 0.0005 | 35.0 | 4.69% | 1057.2 | 2.19% | motif file (matrix) |
svg |
26 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-4 | -9.657e+00 | 0.0009 | 56.0 | 7.51% | 2085.5 | 4.33% | motif file (matrix) |
svg |
27 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-3 | -8.793e+00 | 0.0020 | 9.0 | 1.21% | 122.7 | 0.25% | motif file (matrix) |
svg |
28 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-3 | -8.666e+00 | 0.0022 | 58.0 | 7.77% | 2269.5 | 4.71% | motif file (matrix) |
svg |
29 |
| CRE(bZIP)/Promoter/Homer | 1e-3 | -8.567e+00 | 0.0024 | 13.0 | 1.74% | 250.3 | 0.52% | motif file (matrix) |
svg |
30 |
| Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer | 1e-3 | -8.133e+00 | 0.0036 | 67.0 | 8.98% | 2784.2 | 5.78% | motif file (matrix) |
svg |
31 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-3 | -8.111e+00 | 0.0036 | 37.0 | 4.96% | 1282.4 | 2.66% | motif file (matrix) |
svg |
32 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-3 | -8.089e+00 | 0.0036 | 63.0 | 8.45% | 2580.9 | 5.36% | motif file (matrix) |
svg |
33 |
| Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer | 1e-3 | -8.027e+00 | 0.0036 | 47.0 | 6.30% | 1773.5 | 3.68% | motif file (matrix) |
svg |
34 |
| Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer | 1e-3 | -7.928e+00 | 0.0039 | 12.0 | 1.61% | 233.4 | 0.48% | motif file (matrix) |
svg |
35 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-3 | -7.896e+00 | 0.0039 | 56.0 | 7.51% | 2238.9 | 4.65% | motif file (matrix) |
svg |
36 |
| Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer | 1e-3 | -7.513e+00 | 0.0055 | 42.0 | 5.63% | 1569.0 | 3.26% | motif file (matrix) |
svg |
37 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.430e+00 | 0.0058 | 32.0 | 4.29% | 1093.6 | 2.27% | motif file (matrix) |
svg |
38 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-2 | -6.637e+00 | 0.0126 | 30.0 | 4.02% | 1053.7 | 2.19% | motif file (matrix) |
svg |
39 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.313e+00 | 0.0169 | 14.0 | 1.88% | 360.1 | 0.75% | motif file (matrix) |
svg |
40 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-2 | -6.176e+00 | 0.0189 | 34.0 | 4.56% | 1282.2 | 2.66% | motif file (matrix) |
svg |
41 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-2 | -6.138e+00 | 0.0192 | 18.0 | 2.41% | 535.3 | 1.11% | motif file (matrix) |
svg |
42 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-2 | -6.074e+00 | 0.0200 | 9.0 | 1.21% | 180.2 | 0.37% | motif file (matrix) |
svg |
43 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-2 | -6.016e+00 | 0.0206 | 216.0 | 28.95% | 11752.6 | 24.39% | motif file (matrix) |
svg |
44 |
| Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer | 1e-2 | -5.936e+00 | 0.0219 | 76.0 | 10.19% | 3535.8 | 7.34% | motif file (matrix) |
svg |
45 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -5.689e+00 | 0.0274 | 37.0 | 4.96% | 1475.3 | 3.06% | motif file (matrix) |
svg |
46 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-2 | -5.535e+00 | 0.0312 | 106.0 | 14.21% | 5300.2 | 11.00% | motif file (matrix) |
svg |
47 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-2 | -5.497e+00 | 0.0318 | 155.0 | 20.78% | 8188.9 | 16.99% | motif file (matrix) |
svg |
48 |
| Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer | 1e-2 | -5.420e+00 | 0.0336 | 113.0 | 15.15% | 5727.7 | 11.89% | motif file (matrix) |
svg |
49 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-2 | -5.108e+00 | 0.0449 | 24.0 | 3.22% | 876.2 | 1.82% | motif file (matrix) |
svg |
50 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-2 | -5.056e+00 | 0.0464 | 65.0 | 8.71% | 3050.4 | 6.33% | motif file (matrix) |
svg |
51 |
| Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-2 | -4.977e+00 | 0.0492 | 136.0 | 18.23% | 7170.3 | 14.88% | motif file (matrix) |
svg |
52 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -4.966e+00 | 0.0492 | 74.0 | 9.92% | 3569.0 | 7.41% | motif file (matrix) |
svg |
53 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-2 | -4.937e+00 | 0.0493 | 21.0 | 2.82% | 744.3 | 1.54% | motif file (matrix) |
svg |
54 |
| GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer | 1e-2 | -4.887e+00 | 0.0509 | 8.0 | 1.07% | 179.4 | 0.37% | motif file (matrix) |
svg |
55 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-2 | -4.843e+00 | 0.0522 | 60.0 | 8.04% | 2803.3 | 5.82% | motif file (matrix) |
svg |
56 |
| X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-2 | -4.829e+00 | 0.0522 | 9.0 | 1.21% | 219.6 | 0.46% | motif file (matrix) |
svg |
57 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-2 | -4.657e+00 | 0.0606 | 17.0 | 2.28% | 574.0 | 1.19% | motif file (matrix) |
svg |