Information for 15-CGCMATYRWTMTG (Motif 26)

A G T C A T C G A G T C G T C A C G T A A C G T A G T C C T G A C G A T A C G T G T C A A C G T A C T G
Reverse Opposite:
A G T C C G T A C A G T C G T A C G T A A G C T C T A G C G T A A C G T A C G T A C T G A T G C A C T G
p-value:1e-9
log p-value:-2.220e+01
Information Content per bp:1.844
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.2 +/- 35.2bp
Average Position of motif in Background56.5 +/- 47.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.1/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CGCMATYRWTMTG
GTCCGCCATTA-----
 A C G T A C G T A C G T A G T C A T C G A G T C G T C A C G T A A C G T A G T C C T G A C G A T A C G T G T C A A C G T A C T G
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T A C G T A C G T A C G T

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGCMATYRWTMTG
RGCCATYAATCA-
 A G T C A T C G A G T C G T C A C G T A A C G T A G T C C T G A C G A T A C G T G T C A A C G T A C T G
C T A G T A C G G A T C T G A C T C G A A C G T G A C T G C T A T C G A A G C T G A T C G C T A A C G T

SOX9/MA0077.1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CGCMATYRWTMTG
--CCATTGTTC--
 A G T C A T C G A G T C G T C A C G T A A C G T A G T C C T G A C G A T A C G T G T C A A C G T A C T G
A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T A C G T

PH0063.1_Hoxb8/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CGCMATYRWTMTG
ACCGGCAATTAATAAA
 A C G T A C G T A C G T A G T C A T C G A G T C G T C A C G T A A C G T A G T C C T G A C G A T A C G T G T C A A C G T A C T G
G C T A T A G C A G T C C A T G C T A G G A T C G T C A C G T A C G A T G C A T C G T A G C T A G A C T G T C A C T G A C G T A

MF0010.1_Homeobox_class/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CGCMATYRWTMTG
---AATTATT---
 A G T C A T C G A G T C G T C A C G T A A C G T A G T C C T G A C G A T A C G T G T C A A C G T A C T G
A C G T A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T

Hoxa9/MA0594.1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CGCMATYRWTMTG
-GCCATAAATCA-
 A G T C A T C G A G T C G T C A C G T A A C G T A G T C C T G A C G A T A C G T G T C A A C G T A C T G
A C G T T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A A C G T

Dux/MA0611.1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CGCMATYRWTMTG
-CCAATCAA----
 A G T C A T C G A G T C G T C A C G T A A C G T A G T C C T G A C G A T A C G T G T C A A C G T A C T G
A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CGCMATYRWTMTG
GGCCATAAATCA-
 A G T C A T C G A G T C G T C A C G T A A C G T A G T C C T G A C G A T A C G T G T C A A C G T A C T G
C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CGCMATYRWTMTG---
--TAATTGTTCTAAAC
 A G T C A T C G A G T C G T C A C G T A A C G T A G T C C T G A C G A T A C G T G T C A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CGCMATYRWTMTG
--CCATTGTTYB-
 A G T C A T C G A G T C G T C A C G T A A C G T A G T C C T G A C G A T A C G T G T C A A C G T A C T G
A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T