Information for 14-AGCTCCATAM (Motif 24)

C G T A A C T G A G T C A G C T A T G C G T A C G C T A A G C T C G T A G T A C
Reverse Opposite:
A C T G G C A T T C G A C G A T A C T G T A C G C T G A T C A G T G A C A C G T
p-value:1e-9
log p-value:-2.233e+01
Information Content per bp:1.658
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.49%
Number of Background Sequences with motif358.6
Percentage of Background Sequences with motif0.74%
Average Position of motif in Targets51.5 +/- 28.2bp
Average Position of motif in Background50.3 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pou2f3/MA0627.1/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----AGCTCCATAM--
TNTAATTTGCATACNA
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A G C T A T G C G T A C G C T A A G C T C G T A G T A C A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0145.1_Pou2f3/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----AGCTCCATAM--
TNTAATTTGCATACNA
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A G C T A T G C G T A C G C T A A G C T C G T A G T A C A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0144.1_Pou2f2/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----AGCTCCATAM--
TNTAATTTGCATANNN
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A G C T A T G C G T A C G C T A A G C T C G T A G T A C A C G T A C G T
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGCTCCATAM
ATTTGCATAA
 C G T A A C T G A G T C A G C T A T G C G T A C G C T A A G C T C G T A G T A C
C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

POU3F4/MA0789.1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGCTCCATAM
ATTTGCATA-
 C G T A A C T G A G T C A G C T A T G C G T A C G C T A A G C T C G T A G T A C
G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGCTCCATAM
ATTTGCATA-
 C G T A A C T G A G T C A G C T A T G C G T A C G C T A A G C T C G T A G T A C
G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGCTCCATAM
TAATTTGCATAA
 A C G T A C G T C G T A A C T G A G T C A G C T A T G C G T A C G C T A A G C T C G T A G T A C
C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A

POU2F1/MA0785.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AGCTCCATAM-
AATTTGCATANT
 A C G T C G T A A C T G A G T C A G C T A T G C G T A C G C T A A G C T C G T A G T A C A C G T
G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T

POU2F2/MA0507.1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AGCTCCATAM
TTCATTTGCATAT
 A C G T A C G T A C G T C G T A A C T G A G T C A G C T A T G C G T A C G C T A A G C T C G T A G T A C
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

POU3F2/MA0787.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AGCTCCATAM
TAATTTGCATAA
 A C G T A C G T C G T A A C T G A G T C A G C T A T G C G T A C G C T A A G C T C G T A G T A C
C G A T T G C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A A G C T C G T A G C T A