Information for 13-GKCWGCCMRRRTCGCC (Motif 15)

A C T G A C T G A G T C C G T A A C T G A G T C A G T C G T A C C T G A C T A G T C A G A C G T G T A C A C T G A T G C A G T C
Reverse Opposite:
A C T G A T C G A G T C A C T G C G T A A G T C A G T C A G C T A C T G A C T G A C T G A G T C C G A T A C T G G T A C A G T C
p-value:1e-11
log p-value:-2.565e+01
Information Content per bp:1.848
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.8 +/- 27.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:1
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GKCWGCCMRRRTCGCC--
---TGCCTGCGYCMCCTT
 A C T G A C T G A G T C C G T A A C T G A G T C A G T C G T A C C T G A C T A G T C A G A C G T G T A C A C T G A T G C A G T C A C G T A C G T
A C G T A C G T A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GKCWGCCMRRRTCGCC
--CTGCCCGCA-----
 A C T G A C T G A G T C C G T A A C T G A G T C A G T C G T A C C T G A C T A G T C A G A C G T G T A C A C T G A T G C A G T C
A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:GKCWGCCMRRRTCGCC
---TGCCAA-------
 A C T G A C T G A G T C C G T A A C T G A G T C A G T C G T A C C T G A C T A G T C A G A C G T G T A C A C T G A T G C A G T C
A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GKCWGCCMRRRTCGCC
-CGTGCCAAG------
 A C T G A C T G A G T C C G T A A C T G A G T C A G T C G T A C C T G A C T A G T C A G A C G T G T A C A C T G A T G C A G T C
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.47
Offset:2
Orientation:forward strand
Alignment:GKCWGCCMRRRTCGCC
--TTGCCAAG------
 A C T G A C T G A G T C C G T A A C T G A G T C A G T C G T A C C T G A C T A G T C A G A C G T G T A C A C T G A T G C A G T C
A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.46
Offset:-3
Orientation:reverse strand
Alignment:---GKCWGCCMRRRTCGCC
TGAGTCAGCA---------
 A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A G T C A G T C G T A C C T G A C T A G T C A G A C G T G T A C A C T G A T G C A G T C
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.46
Offset:-5
Orientation:reverse strand
Alignment:-----GKCWGCCMRRRTCGCC
TGGCAGNCTGCCAG-------
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A G T C A G T C G T A C C T G A C T A G T C A G A C G T G T A C A C T G A T G C A G T C
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.46
Offset:8
Orientation:forward strand
Alignment:GKCWGCCMRRRTCGCC
--------AGCGCGCC
 A C T G A C T G A G T C C G T A A C T G A G T C A G T C G T A C C T G A C T A G T C A G A C G T G T A C A C T G A T G C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C

MZF1/MA0056.1/Jaspar

Match Rank:9
Score:0.45
Offset:11
Orientation:reverse strand
Alignment:GKCWGCCMRRRTCGCC-
-----------TCCCCA
 A C T G A C T G A G T C C G T A A C T G A G T C A G T C G T A C C T G A C T A G T C A G A C G T G T A C A C T G A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.45
Offset:1
Orientation:reverse strand
Alignment:GKCWGCCMRRRTCGCC
-BCAGACWA-------
 A C T G A C T G A G T C C G T A A C T G A G T C A G T C G T A C C T G A C T A G T C A G A C G T G T A C A C T G A T G C A G T C
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T