Information for 8-CYTTCTTTTGTCA (Motif 12)

T A G C G A T C C G A T A C G T A G T C A C G T A C G T A G C T A C G T A C T G A G C T A T G C C G T A
Reverse Opposite:
A C G T A T C G C T G A A G T C C G T A C T G A C G T A C G T A A C T G G T C A C G T A C T A G A T C G
p-value:1e-12
log p-value:-2.852e+01
Information Content per bp:1.828
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif7.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.1 +/- 22.6bp
Average Position of motif in Background53.5 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:1
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CYTTCTTTTGTCA
----CCWTTGTY-
 T A G C G A T C C G A T A C G T A G T C A C G T A C G T A G C T A C G T A C T G A G C T A T G C C G T A
A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CYTTCTTTTGTCA----
-ANTCCTTTGTCTNNNN
 T A G C G A T C C G A T A C G T A G T C A C G T A C G T A G C T A C G T A C T G A G C T A T G C C G T A A C G T A C G T A C G T A C G T
A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:CYTTCTTTTGTCA-
-------NTGTCAN
 T A G C G A T C C G A T A C G T A G T C A C G T A C G T A G C T A C G T A C T G A G C T A T G C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.60
Offset:7
Orientation:forward strand
Alignment:CYTTCTTTTGTCA--
-------YTGWCADY
 T A G C G A T C C G A T A C G T A G T C A C G T A C G T A G C T A C G T A C T G A G C T A T G C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CYTTCTTTTGTCA
ACTTTCGTTTCT--
 A C G T T A G C G A T C C G A T A C G T A G T C A C G T A C G T A G C T A C G T A C T G A G C T A T G C C G T A
T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CYTTCTTTTGTCA-
----CCTTTGTTTT
 T A G C G A T C C G A T A C G T A G T C A C G T A C G T A G C T A C G T A C T G A G C T A T G C C G T A A C G T
A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

PB0121.1_Foxj3_2/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CYTTCTTTTGTCA--
NNCTTTGTTTTGNTNNN
 A C G T A C G T T A G C G A T C C G A T A C G T A G T C A C G T A C G T A G C T A C G T A C T G A G C T A T G C C G T A A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:8
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CYTTCTTTTGTCA
----CCTTTGTT-
 T A G C G A T C C G A T A C G T A G T C A C G T A C G T A G C T A C G T A C T G A G C T A T G C C G T A
A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.57
Offset:8
Orientation:forward strand
Alignment:CYTTCTTTTGTCA---
--------TGTCANYT
 T A G C G A T C C G A T A C G T A G T C A C G T A C G T A G C T A C G T A C T G A G C T A T G C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CYTTCTTTTGTCA-----
---NCNTTTGTTATTTNN
 T A G C G A T C C G A T A C G T A G T C A C G T A C G T A G C T A C G T A C T G A G C T A T G C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T