Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-248 | -5.718e+02 | 0.0000 | 210.0 | 31.30% | 444.8 | 0.94% | motif file (matrix) |
svg |
2 |
| Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-100 | -2.317e+02 | 0.0000 | 165.0 | 24.59% | 1343.9 | 2.83% | motif file (matrix) |
svg |
3 |
| Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer | 1e-72 | -1.674e+02 | 0.0000 | 128.0 | 19.08% | 1132.8 | 2.39% | motif file (matrix) |
svg |
4 |
| Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer | 1e-70 | -1.627e+02 | 0.0000 | 111.0 | 16.54% | 817.4 | 1.72% | motif file (matrix) |
svg |
5 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-52 | -1.200e+02 | 0.0000 | 200.0 | 29.81% | 4280.1 | 9.02% | motif file (matrix) |
svg |
6 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-44 | -1.014e+02 | 0.0000 | 184.0 | 27.42% | 4163.2 | 8.77% | motif file (matrix) |
svg |
7 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-39 | -9.155e+01 | 0.0000 | 170.0 | 25.34% | 3884.2 | 8.18% | motif file (matrix) |
svg |
8 |
| Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer | 1e-38 | -8.967e+01 | 0.0000 | 79.0 | 11.77% | 832.5 | 1.75% | motif file (matrix) |
svg |
9 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-34 | -7.973e+01 | 0.0000 | 114.0 | 16.99% | 2055.7 | 4.33% | motif file (matrix) |
svg |
10 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-28 | -6.589e+01 | 0.0000 | 77.0 | 11.48% | 1130.0 | 2.38% | motif file (matrix) |
svg |
11 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-28 | -6.498e+01 | 0.0000 | 94.0 | 14.01% | 1702.0 | 3.59% | motif file (matrix) |
svg |
12 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-26 | -5.992e+01 | 0.0000 | 91.0 | 13.56% | 1717.1 | 3.62% | motif file (matrix) |
svg |
13 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-23 | -5.414e+01 | 0.0000 | 72.0 | 10.73% | 1201.0 | 2.53% | motif file (matrix) |
svg |
14 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-21 | -4.880e+01 | 0.0000 | 104.0 | 15.50% | 2551.0 | 5.37% | motif file (matrix) |
svg |
15 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-18 | -4.367e+01 | 0.0000 | 89.0 | 13.26% | 2110.5 | 4.45% | motif file (matrix) |
svg |
16 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-17 | -3.946e+01 | 0.0000 | 79.0 | 11.77% | 1848.6 | 3.90% | motif file (matrix) |
svg |
17 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-14 | -3.286e+01 | 0.0000 | 74.0 | 11.03% | 1876.5 | 3.95% | motif file (matrix) |
svg |
18 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-13 | -3.153e+01 | 0.0000 | 58.0 | 8.64% | 1278.1 | 2.69% | motif file (matrix) |
svg |
19 |
| Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer | 1e-13 | -3.141e+01 | 0.0000 | 87.0 | 12.97% | 2504.5 | 5.28% | motif file (matrix) |
svg |
20 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-8 | -1.943e+01 | 0.0000 | 62.0 | 9.24% | 1936.7 | 4.08% | motif file (matrix) |
svg |
21 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-7 | -1.721e+01 | 0.0000 | 28.0 | 4.17% | 578.5 | 1.22% | motif file (matrix) |
svg |
22 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-7 | -1.650e+01 | 0.0000 | 39.0 | 5.81% | 1040.6 | 2.19% | motif file (matrix) |
svg |
23 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-6 | -1.611e+01 | 0.0000 | 236.0 | 35.17% | 12348.5 | 26.02% | motif file (matrix) |
svg |
24 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-6 | -1.483e+01 | 0.0000 | 230.0 | 34.28% | 12150.1 | 25.60% | motif file (matrix) |
svg |
25 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-6 | -1.394e+01 | 0.0000 | 120.0 | 17.88% | 5472.0 | 11.53% | motif file (matrix) |
svg |
26 |
| Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer | 1e-5 | -1.214e+01 | 0.0001 | 79.0 | 11.77% | 3321.9 | 7.00% | motif file (matrix) |
svg |
27 |
| Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer | 1e-5 | -1.202e+01 | 0.0001 | 19.0 | 2.83% | 396.1 | 0.83% | motif file (matrix) |
svg |
28 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-4 | -1.143e+01 | 0.0001 | 32.0 | 4.77% | 960.0 | 2.02% | motif file (matrix) |
svg |
29 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-4 | -1.107e+01 | 0.0002 | 72.0 | 10.73% | 3034.3 | 6.39% | motif file (matrix) |
svg |
30 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.106e+01 | 0.0002 | 35.0 | 5.22% | 1117.3 | 2.35% | motif file (matrix) |
svg |
31 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-4 | -1.082e+01 | 0.0002 | 105.0 | 15.65% | 4952.4 | 10.43% | motif file (matrix) |
svg |
32 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-4 | -1.072e+01 | 0.0003 | 157.0 | 23.40% | 8136.2 | 17.14% | motif file (matrix) |
svg |
33 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-4 | -9.398e+00 | 0.0009 | 34.0 | 5.07% | 1166.8 | 2.46% | motif file (matrix) |
svg |
34 |
| Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer | 1e-4 | -9.352e+00 | 0.0009 | 33.0 | 4.92% | 1120.7 | 2.36% | motif file (matrix) |
svg |
35 |
| TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer | 1e-3 | -8.822e+00 | 0.0015 | 10.0 | 1.49% | 164.0 | 0.35% | motif file (matrix) |
svg |
36 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-3 | -8.544e+00 | 0.0020 | 15.0 | 2.24% | 351.7 | 0.74% | motif file (matrix) |
svg |
37 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-3 | -8.068e+00 | 0.0031 | 60.0 | 8.94% | 2662.2 | 5.61% | motif file (matrix) |
svg |
38 |
| CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-3 | -7.767e+00 | 0.0041 | 47.0 | 7.00% | 1968.8 | 4.15% | motif file (matrix) |
svg |
39 |
| ETS(ETS)/Promoter/Homer | 1e-3 | -7.696e+00 | 0.0042 | 20.0 | 2.98% | 598.7 | 1.26% | motif file (matrix) |
svg |
40 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-3 | -7.587e+00 | 0.0046 | 46.0 | 6.86% | 1930.3 | 4.07% | motif file (matrix) |
svg |
41 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-3 | -7.584e+00 | 0.0046 | 145.0 | 21.61% | 7905.1 | 16.66% | motif file (matrix) |
svg |
42 |
| Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer | 1e-3 | -7.206e+00 | 0.0064 | 5.0 | 0.75% | 49.7 | 0.10% | motif file (matrix) |
svg |
43 |
| OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer | 1e-3 | -6.995e+00 | 0.0078 | 8.0 | 1.19% | 138.2 | 0.29% | motif file (matrix) |
svg |
44 |
| PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer | 1e-2 | -6.706e+00 | 0.0101 | 15.0 | 2.24% | 421.2 | 0.89% | motif file (matrix) |
svg |
45 |
| Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer | 1e-2 | -6.595e+00 | 0.0111 | 99.0 | 14.75% | 5185.6 | 10.93% | motif file (matrix) |
svg |
46 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-2 | -6.567e+00 | 0.0111 | 54.0 | 8.05% | 2486.2 | 5.24% | motif file (matrix) |
svg |
47 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-2 | -6.524e+00 | 0.0114 | 41.0 | 6.11% | 1756.0 | 3.70% | motif file (matrix) |
svg |
48 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-2 | -6.478e+00 | 0.0117 | 46.0 | 6.86% | 2040.7 | 4.30% | motif file (matrix) |
svg |
49 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-2 | -6.438e+00 | 0.0119 | 42.0 | 6.26% | 1820.9 | 3.84% | motif file (matrix) |
svg |
50 |
| RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer | 1e-2 | -6.112e+00 | 0.0161 | 44.0 | 6.56% | 1966.7 | 4.14% | motif file (matrix) |
svg |
51 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-2 | -5.706e+00 | 0.0237 | 41.0 | 6.11% | 1840.6 | 3.88% | motif file (matrix) |
svg |
52 |
| Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer | 1e-2 | -5.663e+00 | 0.0243 | 11.0 | 1.64% | 292.0 | 0.62% | motif file (matrix) |
svg |
53 |
| GFY-Staf(?,Zf)/Promoter/Homer | 1e-2 | -5.604e+00 | 0.0253 | 5.0 | 0.75% | 71.7 | 0.15% | motif file (matrix) |
svg |
54 |
| KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer | 1e-2 | -5.560e+00 | 0.0259 | 42.0 | 6.26% | 1913.4 | 4.03% | motif file (matrix) |
svg |
55 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-2 | -5.493e+00 | 0.0272 | 16.0 | 2.38% | 527.5 | 1.11% | motif file (matrix) |
svg |
56 |
| Sp1(Zf)/Promoter/Homer | 1e-2 | -5.455e+00 | 0.0278 | 13.0 | 1.94% | 389.2 | 0.82% | motif file (matrix) |
svg |
57 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-2 | -5.367e+00 | 0.0298 | 24.0 | 3.58% | 939.2 | 1.98% | motif file (matrix) |
svg |
58 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-2 | -5.151e+00 | 0.0364 | 18.0 | 2.68% | 646.4 | 1.36% | motif file (matrix) |
svg |
59 |
| Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer | 1e-2 | -5.091e+00 | 0.0380 | 29.0 | 4.32% | 1232.2 | 2.60% | motif file (matrix) |
svg |
60 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-2 | -5.066e+00 | 0.0383 | 46.0 | 6.86% | 2204.5 | 4.64% | motif file (matrix) |
svg |
61 |
| KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer | 1e-2 | -5.033e+00 | 0.0389 | 48.0 | 7.15% | 2326.9 | 4.90% | motif file (matrix) |
svg |
62 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-2 | -4.881e+00 | 0.0446 | 56.0 | 8.35% | 2825.9 | 5.95% | motif file (matrix) |
svg |
63 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-2 | -4.773e+00 | 0.0488 | 21.0 | 3.13% | 828.5 | 1.75% | motif file (matrix) |
svg |
64 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-2 | -4.721e+00 | 0.0507 | 27.0 | 4.02% | 1158.0 | 2.44% | motif file (matrix) |
svg |
65 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-2 | -4.652e+00 | 0.0534 | 24.0 | 3.58% | 999.7 | 2.11% | motif file (matrix) |
svg |
66 |
| MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer | 1e-2 | -4.633e+00 | 0.0536 | 47.0 | 7.00% | 2321.0 | 4.89% | motif file (matrix) |
svg |