Information for 11-GAAGKTACSATAACTM (Motif 9)

A T C G G T C A C T G A C T A G C A G T A G C T T G C A G T A C T A C G C G T A A G C T G T C A C T G A A T G C A C G T G T A C
Reverse Opposite:
C A T G G T C A A T C G A G C T C A G T T C G A C G A T A T G C C A T G A C G T T C G A G T C A A G T C A G C T A C G T A T G C
p-value:1e-13
log p-value:-3.024e+01
Information Content per bp:1.634
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.64%
Number of Background Sequences with motif23.4
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets47.4 +/- 27.9bp
Average Position of motif in Background57.7 +/- 20.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mecom/MA0029.1/Jaspar

Match Rank:1
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GAAGKTACSATAACTM
-AAGATAAGATAACA-
 A T C G G T C A C T G A C T A G C A G T A G C T T G C A G T A C T A C G C G T A A G C T G T C A C T G A A T G C A C G T G T A C
A C G T C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GAAGKTACSATAACTM
NGAAGC-----------
 A C G T A T C G G T C A C T G A C T A G C A G T A G C T T G C A G T A C T A C G C G T A A G C T G T C A C T G A A T G C A C G T G T A C
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0032.1_IRC900814_1/Jaspar

Match Rank:3
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GAAGKTACSATAACTM--
--ATTTACGACAAATAGC
 A T C G G T C A C T G A C T A G C A G T A G C T T G C A G T A C T A C G C G T A A G C T G T C A C T G A A T G C A C G T G T A C A C G T A C G T
A C G T A C G T C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C

PH0166.1_Six6_2/Jaspar

Match Rank:4
Score:0.47
Offset:-2
Orientation:forward strand
Alignment:--GAAGKTACSATAACTM
AATAGGGTATCAATATT-
 A C G T A C G T A T C G G T C A C T G A C T A G C A G T A G C T T G C A G T A C T A C G C G T A A G C T G T C A C T G A A T G C A C G T G T A C
C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T A C G T

PH0017.1_Cux1_2/Jaspar

Match Rank:5
Score:0.47
Offset:1
Orientation:forward strand
Alignment:GAAGKTACSATAACTM
-TAATGATGATCACTA
 A T C G G T C A C T G A C T A G C A G T A G C T T G C A G T A C T A C G C G T A A G C T G T C A C T G A A T G C A C G T G T A C
A C G T C G A T T G C A T C G A A G C T C A T G G C T A C G A T C T A G C G T A C A G T G A T C T C G A G T A C C G A T C G T A

PH0161.1_Six1/Jaspar

Match Rank:6
Score:0.47
Offset:-2
Orientation:forward strand
Alignment:--GAAGKTACSATAACTM
GATGGGGTATCATTTTT-
 A C G T A C G T A T C G G T C A C T G A C T A G C A G T A G C T T G C A G T A C T A C G C G T A A G C T G T C A C T G A A T G C A C G T G T A C
C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:7
Score:0.47
Offset:-1
Orientation:forward strand
Alignment:-GAAGKTACSATAACTM
AAAAGTCAA--------
 A C G T A T C G G T C A C T G A C T A G C A G T A G C T T G C A G T A C T A C G C G T A A G C T G T C A C T G A A T G C A C G T G T A C
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:8
Score:0.47
Offset:8
Orientation:reverse strand
Alignment:GAAGKTACSATAACTM--
--------GTTAACTAGN
 A T C G G T C A C T G A C T A G C A G T A G C T T G C A G T A C T A C G C G T A A G C T G T C A C T G A A T G C A C G T G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T

GATA3/MA0037.2/Jaspar

Match Rank:9
Score:0.46
Offset:2
Orientation:forward strand
Alignment:GAAGKTACSATAACTM
--AGATAAGA------
 A T C G G T C A C T G A C T A G C A G T A G C T T G C A G T A C T A C G C G T A A G C T G T C A C T G A A T G C A C G T G T A C
A C G T A C G T C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0012.1_Elf3_1/Jaspar

Match Rank:10
Score:0.46
Offset:-6
Orientation:forward strand
Alignment:------GAAGKTACSATAACTM
AACAAGGAAGTAA---------
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G G T C A C T G A C T A G C A G T A G C T T G C A G T A C T A C G C G T A A G C T G T C A C T G A A T G C A C G T G T A C
C G A T C G T A G T A C T G C A T G C A C T A G C A T G C G T A G C T A T C A G G A C T C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T