Information for 10-AGTAGTTGTT (Motif 22)

C T G A A T C G C A G T C T G A C T A G C G A T A C G T A T C G A C G T A C G T
Reverse Opposite:
C G T A C G T A T A G C C G T A C G T A G A T C G A C T G T C A A T G C A G C T
p-value:1e-10
log p-value:-2.443e+01
Information Content per bp:1.839
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.24%
Number of Background Sequences with motif98.8
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets48.4 +/- 28.8bp
Average Position of motif in Background47.1 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0172.1_Sox1_2/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-AGTAGTTGTT----
CTATAATTGTTAGCG
 A C G T C T G A A T C G C A G T C T G A C T A G C G A T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G

PB0062.1_Sox12_1/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:AGTAGTTGTT------
--TAATTGTTCTAAAC
 C T G A A T C G C A G T C T G A C T A G C G A T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

PB0175.1_Sox4_2/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AGTAGTTGTT-----
GGAAAAATTGTTAGGAA
 A C G T A C G T C T G A A T C G C A G T C T G A C T A G C G A T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PB0063.1_Sox13_1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AGTAGTTGTT-----
AANTTATTGTTCTNNA
 A C G T C T G A A T C G C A G T C T G A C T A G C G A T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

MYF6/MA0667.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AGTAGTTGTT
AACAGCTGTT
 C T G A A T C G C A G T C T G A C T A G C G A T A C G T A T C G A C G T A C G T
T C G A C T G A A T G C C G T A T C A G A G T C A G C T A C T G A G C T A G C T

PB0122.1_Foxk1_2/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AGTAGTTGTT-----
NNNTGTTGTTGTTNG
 C T G A A T C G C A G T C T G A C T A G C G A T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

MF0011.1_HMG_class/Jaspar

Match Rank:7
Score:0.63
Offset:4
Orientation:forward strand
Alignment:AGTAGTTGTT
----ATTGTT
 C T G A A T C G C A G T C T G A C T A G C G A T A C G T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AGTAGTTGTT--
--CCATTGTTNY
 C T G A A T C G C A G T C T G A C T A G C G A T A C G T A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

Sox5/MA0087.1/Jaspar

Match Rank:9
Score:0.63
Offset:4
Orientation:forward strand
Alignment:AGTAGTTGTT-
----ATTGTTA
 C T G A A T C G C A G T C T G A C T A G C G A T A C G T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T

PB0072.1_Sox5_1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AGTAGTTGTT-----
NNTTTATTGTTCTNNN
 A C G T C T G A A T C G C A G T C T G A C T A G C G A T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A