Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-67 | -1.543e+02 | 0.0000 | 196.0 | 20.76% | 2149.8 | 4.76% | motif file (matrix) |
svg |
2 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-63 | -1.465e+02 | 0.0000 | 189.0 | 20.02% | 2097.4 | 4.65% | motif file (matrix) |
svg |
3 |
| Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer | 1e-63 | -1.461e+02 | 0.0000 | 163.0 | 17.27% | 1545.5 | 3.42% | motif file (matrix) |
svg |
4 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-61 | -1.425e+02 | 0.0000 | 161.0 | 17.06% | 1547.0 | 3.43% | motif file (matrix) |
svg |
5 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-58 | -1.355e+02 | 0.0000 | 148.0 | 15.68% | 1364.4 | 3.02% | motif file (matrix) |
svg |
6 |
| c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer | 1e-54 | -1.262e+02 | 0.0000 | 139.0 | 14.72% | 1289.0 | 2.86% | motif file (matrix) |
svg |
7 |
| bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-54 | -1.246e+02 | 0.0000 | 127.0 | 13.45% | 1075.8 | 2.38% | motif file (matrix) |
svg |
8 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-52 | -1.220e+02 | 0.0000 | 218.0 | 23.09% | 3228.6 | 7.15% | motif file (matrix) |
svg |
9 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-49 | -1.144e+02 | 0.0000 | 222.0 | 23.52% | 3496.8 | 7.75% | motif file (matrix) |
svg |
10 |
| NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-42 | -9.882e+01 | 0.0000 | 170.0 | 18.01% | 2406.0 | 5.33% | motif file (matrix) |
svg |
11 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-25 | -5.904e+01 | 0.0000 | 69.0 | 7.31% | 675.9 | 1.50% | motif file (matrix) |
svg |
12 |
| HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer | 1e-18 | -4.333e+01 | 0.0000 | 178.0 | 18.86% | 4199.5 | 9.30% | motif file (matrix) |
svg |
13 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-16 | -3.869e+01 | 0.0000 | 258.0 | 27.33% | 7388.7 | 16.37% | motif file (matrix) |
svg |
14 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-13 | -3.123e+01 | 0.0000 | 207.0 | 21.93% | 5862.2 | 12.99% | motif file (matrix) |
svg |
15 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-11 | -2.726e+01 | 0.0000 | 79.0 | 8.37% | 1560.4 | 3.46% | motif file (matrix) |
svg |
16 |
| E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer | 1e-10 | -2.404e+01 | 0.0000 | 76.0 | 8.05% | 1575.9 | 3.49% | motif file (matrix) |
svg |
17 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-9 | -2.158e+01 | 0.0000 | 26.0 | 2.75% | 274.4 | 0.61% | motif file (matrix) |
svg |
18 |
| E-box(bHLH)/Promoter/Homer | 1e-8 | -1.971e+01 | 0.0000 | 28.0 | 2.97% | 345.1 | 0.76% | motif file (matrix) |
svg |
19 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-8 | -1.870e+01 | 0.0000 | 43.0 | 4.56% | 753.3 | 1.67% | motif file (matrix) |
svg |
20 |
| E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer | 1e-7 | -1.721e+01 | 0.0000 | 112.0 | 11.86% | 3136.0 | 6.95% | motif file (matrix) |
svg |
21 |
| E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer | 1e-7 | -1.692e+01 | 0.0000 | 43.0 | 4.56% | 803.9 | 1.78% | motif file (matrix) |
svg |
22 |
| E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer | 1e-7 | -1.685e+01 | 0.0000 | 108.0 | 11.44% | 3009.5 | 6.67% | motif file (matrix) |
svg |
23 |
| NFY(CCAAT)/Promoter/Homer | 1e-6 | -1.576e+01 | 0.0000 | 64.0 | 6.78% | 1508.8 | 3.34% | motif file (matrix) |
svg |
24 |
| PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer | 1e-6 | -1.554e+01 | 0.0000 | 26.0 | 2.75% | 372.4 | 0.83% | motif file (matrix) |
svg |
25 |
| E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer | 1e-5 | -1.352e+01 | 0.0000 | 117.0 | 12.39% | 3576.8 | 7.92% | motif file (matrix) |
svg |
26 |
| TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer | 1e-4 | -1.111e+01 | 0.0002 | 17.0 | 1.80% | 235.9 | 0.52% | motif file (matrix) |
svg |
27 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.108e+01 | 0.0002 | 89.0 | 9.43% | 2677.2 | 5.93% | motif file (matrix) |
svg |
28 |
| HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer | 1e-4 | -9.448e+00 | 0.0010 | 42.0 | 4.45% | 1053.0 | 2.33% | motif file (matrix) |
svg |
29 |
| E2F(E2F)/Hela-CellCycle-Expression/Homer | 1e-3 | -9.011e+00 | 0.0015 | 19.0 | 2.01% | 335.2 | 0.74% | motif file (matrix) |
svg |
30 |
| ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer | 1e-3 | -7.070e+00 | 0.0103 | 2.0 | 0.21% | 2.8 | 0.01% | motif file (matrix) |
svg |
31 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-2 | -6.876e+00 | 0.0121 | 51.0 | 5.40% | 1535.2 | 3.40% | motif file (matrix) |
svg |
32 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.757e+00 | 0.0132 | 79.0 | 8.37% | 2647.2 | 5.86% | motif file (matrix) |
svg |
33 |
| Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer | 1e-2 | -6.434e+00 | 0.0177 | 11.0 | 1.17% | 178.2 | 0.39% | motif file (matrix) |
svg |
34 |
| OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-2 | -6.128e+00 | 0.0234 | 6.0 | 0.64% | 62.9 | 0.14% | motif file (matrix) |
svg |
35 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-2 | -5.915e+00 | 0.0281 | 107.0 | 11.33% | 3901.8 | 8.64% | motif file (matrix) |
svg |
36 |
| Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer | 1e-2 | -5.818e+00 | 0.0301 | 74.0 | 7.84% | 2539.4 | 5.63% | motif file (matrix) |
svg |
37 |
| Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer | 1e-2 | -5.094e+00 | 0.0603 | 34.0 | 3.60% | 1018.6 | 2.26% | motif file (matrix) |
svg |
38 |
| Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.743e+00 | 0.0835 | 155.0 | 16.42% | 6162.5 | 13.65% | motif file (matrix) |
svg |
39 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-2 | -4.687e+00 | 0.0860 | 118.0 | 12.50% | 4548.8 | 10.08% | motif file (matrix) |
svg |