Information for 5-AGAGCCTGAAACC (Motif 8)

C G T A A C T G C G T A A C T G G T A C A G T C A C G T A C T G C G T A C G T A C G T A G T A C A G T C
Reverse Opposite:
A C T G A C T G C G A T A C G T A C G T A G T C C G T A C T A G A C T G A G T C A C G T A G T C C G A T
p-value:1e-10
log p-value:-2.415e+01
Information Content per bp:1.927
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets71.4 +/- 14.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.72
Offset:4
Orientation:forward strand
Alignment:AGAGCCTGAAACC-
----ACTGAAACCA
 C G T A A C T G C G T A A C T G G T A C A G T C A C G T A C T G C G T A C G T A C G T A G T A C A G T C A C G T
A C G T A C G T A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AGAGCCTGAAACC
-GAAACTGAAACT
 C G T A A C T G C G T A A C T G G T A C A G T C A C G T A C T G C G T A C G T A C G T A G T A C A G T C
A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGAGCCTGAAACC
-GAAAGTGAAAGT
 C G T A A C T G C G T A A C T G G T A C A G T C A C G T A C T G C G T A C G T A C G T A G T A C A G T C
A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGAGCCTGAAACC
-GAAAMTGAAACT
 C G T A A C T G C G T A A C T G G T A C A G T C A C G T A C T G C G T A C G T A C G T A G T A C A G T C
A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGAGCCTGAAACC--
GGAAANTGAAACTNA
 C G T A A C T G C G T A A C T G G T A C A G T C A C G T A C T G C G T A C G T A C G T A G T A C A G T C A C G T A C G T
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

PH0164.1_Six4/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGAGCCTGAAACC-----
-ATAAATGACACCTATCA
 C G T A A C T G C G T A A C T G G T A C A G T C A C G T A C T G C G T A C G T A C G T A G T A C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

PB0035.1_Irf5_1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGAGCCTGAAACC--
ATAAACCGAAACCAA
 C G T A A C T G C G T A A C T G G T A C A G T C A C G T A C T G C G T A C G T A C G T A G T A C A G T C A C G T A C G T
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----AGAGCCTGAAACC-
WNAGTCADAVTGAAACTN
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C T G G T A C A G T C A C G T A C T G C G T A C G T A C G T A G T A C A G T C A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

IRF8/MA0652.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGAGCCTGAAACC
TCGAAACCGAAACT
 A C G T C G T A A C T G C G T A A C T G G T A C A G T C A C G T A C T G C G T A C G T A C G T A G T A C A G T C
G A C T G A T C C T A G G T C A C G T A C G T A T A G C G A T C A C T G C T G A C G T A G T C A A T G C G A C T

PB0036.1_Irf6_1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGAGCCTGAAACC-----
-CTGATCGAAACCAAAGT
 C G T A A C T G C G T A A C T G G T A C A G T C A C G T A C T G C G T A C G T A C G T A G T A C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T