Information for 4-GGCTTCTGCTTGGCTT (Motif 4)

C A T G A T C G G T A C C G A T A G C T A T G C A C G T A C T G G T A C A C G T A C G T A T C G A T C G G T A C G A C T A C G T
Reverse Opposite:
T C G A C T G A A C T G A T G C A T G C G T C A C G T A C A T G T A G C C G T A A T C G T C G A C G T A A C T G A T G C G T A C
p-value:1e-12
log p-value:-2.982e+01
Information Content per bp:1.722
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.0 +/- 32.4bp
Average Position of motif in Background13.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYA/MA0060.2/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GGCTTCTGCTTGGCTT-
AGAGTGCTGATTGGTCCA
 A C G T C A T G A T C G G T A C C G A T A G C T A T G C A C G T A C T G G T A C A C G T A C G T A T C G A T C G G T A C G A C T A C G T A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:GGCTTCTGCTTGGCTT
-----CCGATTGGCT-
 C A T G A T C G G T A C C G A T A G C T A T G C A C G T A C T G G T A C A C G T A C G T A T C G A T C G G T A C G A C T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:3
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:GGCTTCTGCTTGGCTT----
-----CTGATTGGTCNATTT
 C A T G A T C G G T A C C G A T A G C T A T G C A C G T A C T G G T A C A C G T A C G T A T C G A T C G G T A C G A C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.65
Offset:6
Orientation:reverse strand
Alignment:GGCTTCTGCTTGGCTT--
------TGATTGGCTANN
 C A T G A T C G G T A C C G A T A G C T A T G C A C G T A C T G G T A C A C G T A C G T A T C G A T C G G T A C G A C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.61
Offset:8
Orientation:reverse strand
Alignment:GGCTTCTGCTTGGCTT-
--------NTTGGCANN
 C A T G A T C G G T A C C G A T A G C T A T G C A C G T A C T G G T A C A C G T A C G T A T C G A T C G G T A C G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.61
Offset:9
Orientation:forward strand
Alignment:GGCTTCTGCTTGGCTT
---------TTGGCA-
 C A T G A T C G G T A C C G A T A G C T A T G C A C G T A C T G G T A C A C G T A C G T A T C G A T C G G T A C G A C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

Dux/MA0611.1/Jaspar

Match Rank:7
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GGCTTCTGCTTGGCTT
-----TTGATTGN---
 C A T G A T C G G T A C C G A T A G C T A T G C A C G T A C T G G T A C A C G T A C G T A T C G A T C G G T A C G A C T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:GGCTTCTGCTTGGCTT-
-------NNTTGGCANN
 C A T G A T C G G T A C C G A T A G C T A T G C A C G T A C T G G T A C A C G T A C G T A T C G A T C G G T A C G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

DUX4/MA0468.1/Jaspar

Match Rank:9
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GGCTTCTGCTTGGCTT-
------TGATTAAATTA
 C A T G A T C G G T A C C G A T A G C T A T G C A C G T A C T G G T A C A C G T A C G T A T C G A T C G G T A C G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G C G T A A C G T C A G T T C G A T C G A C T G A A C G T A G C T C G T A

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:10
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GGCTTCTGCTTGGCTT---
----NWTGATTRGRTTAWN
 C A T G A T C G G T A C C G A T A G C T A T G C A C G T A C T G G T A C A C G T A C G T A T C G A T C G G T A C G A C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G C A T C G A T C T A G C G T A A C G T A C G T C T G A T C A G C T A G A C G T A C G T G C T A C G T A G T A C