Information for 13-ATTTAAATTT (Motif 19)

C G T A A C G T A C G T A G C T C T G A C G T A C G T A C G A T A C G T C G A T
Reverse Opposite:
C G T A C G T A C G T A C G A T A C G T A G C T C T G A G T C A C G T A C G A T
p-value:1e-7
log p-value:-1.616e+01
Information Content per bp:1.864
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif10.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets37.1 +/- 22.8bp
Average Position of motif in Background51.1 +/- 34.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.82
Offset:0
Orientation:forward strand
Alignment:ATTTAAATTT
ATTTGAATT-
 C G T A A C G T A C G T A G C T C T G A C G T A C G T A C G A T A C G T C G A T
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--ATTTAAATTT
TTATGCAAATTA
 A C G T A C G T C G T A A C G T A C G T A G C T C T G A C G T A C G T A C G A T A C G T C G A T
C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A

POU5F1B/MA0792.1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-ATTTAAATTT
TATGCAAAT--
 A C G T C G T A A C G T A C G T A G C T C T G A C G T A C G T A C G A T A C G T C G A T
G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T A C G T

POU3F3/MA0788.1/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---ATTTAAATTT
ATTATGCTAATTT
 A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T G A C G T A C G T A C G A T A C G T C G A T
C G T A C G A T C G A T C G T A A C G T C A T G A G T C G C A T C G T A C T G A G C A T C G A T C G A T

POU2F1/MA0785.1/Jaspar

Match Rank:5
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---ATTTAAATTT
AATATGCAAATT-
 A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T G A C G T A C G T A C G A T A C G T C G A T
G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:6
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---ATTTAAATTT
CGGTTTCAAA---
 A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T G A C G T A C G T A C G A T A C G T C G A T
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T

POU3F2/MA0787.1/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ATTTAAATTT
TTATGCAAATTA
 A C G T A C G T C G T A A C G T A C G T A G C T C T G A C G T A C G T A C G A T A C G T C G A T
C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ATTTAAATTT-
TATGCWAATBAV
 A C G T C G T A A C G T A C G T A G C T C T G A C G T A C G T A C G A T A C G T C G A T A C G T
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

PH0144.1_Pou2f2/Jaspar

Match Rank:9
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----ATTTAAATTT--
TTGTATGCAAATTAGA
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T G A C G T A C G T A C G A T A C G T C G A T A C G T A C G T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ATTTAAATTT-
WATGCAAATGAG
 A C G T C G T A A C G T A C G T A G C T C T G A C G T A C G T A C G A T A C G T C G A T A C G T
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G