Information for 11-CATTGGACGA (Motif 17)

A T G C C G T A C G A T A C G T A C T G A T C G T C G A A T G C A C T G G T C A
Reverse Opposite:
A C G T A G T C A T C G A G C T A T G C A G T C G T C A C G T A A C G T A T C G
p-value:1e-8
log p-value:-1.922e+01
Information Content per bp:1.857
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif17.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets46.2 +/- 17.5bp
Average Position of motif in Background40.8 +/- 20.8bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CATTGGACGA
CCGATTGGCT--
 A C G T A C G T A T G C C G T A C G A T A C G T A C T G A T C G T C G A A T G C A C T G G T C A
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CATTGGACGA---
CTGATTGGTCNATTT
 A C G T A C G T A T G C C G T A C G A T A C G T A C T G A T C G T C G A A T G C A C T G G T C A A C G T A C G T A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CATTGGACGA-
TGATTGGCTANN
 A C G T A T G C C G T A C G A T A C G T A C T G A T C G T C G A A T G C A C T G G T C A A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CATTGGACGA-
-ATTGCGCAAC
 A T G C C G T A C G A T A C G T A C T G A T C G T C G A A T G C A C T G G T C A A C G T
A C G T T G C A A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A G T C

CEBPA/MA0102.3/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CATTGGACGA--
-ATTGCACAATA
 A T G C C G T A C G A T A C G T A C T G A T C G T C G A A T G C A C T G G T C A A C G T A C G T
A C G T T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A

NFYA/MA0060.2/Jaspar

Match Rank:6
Score:0.57
Offset:-8
Orientation:forward strand
Alignment:--------CATTGGACGA
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A C G A T A C G T A C T G A T C G T C G A A T G C A C T G G T C A
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CATTGGACGA
CCATTGTTYB-
 A C G T A T G C C G T A C G A T A C G T A C T G A T C G T C G A A T G C A C T G G T C A
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T

HOXC12/MA0906.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CATTGGACGA--
-NTTTTACGACC
 A T G C C G T A C G A T A C G T A C T G A T C G T C G A A T G C A C T G G T C A A C G T A C G T
A C G T C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C

Sox17/MA0078.1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CATTGGACGA
CTCATTGTC---
 A C G T A C G T A T G C C G T A C G A T A C G T A C T G A T C G T C G A A T G C A C T G G T C A
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T

HOXC11/MA0651.1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CATTGGACGA--
-NTTTTACGACC
 A T G C C G T A C G A T A C G T A C T G A T C G T C G A A T G C A C T G G T C A A C G T A C G T
A C G T C G T A C G A T C A G T C G A T G C A T C G T A A G T C C T A G C T G A A G T C G A T C