Information for 1-SCNGSCACGTGCB (Motif 1)

A T C G A G T C T A G C T C A G A T G C A G T C C T G A A G T C A T C G A G C T A C T G A T G C A G T C
Reverse Opposite:
T C A G T A C G A G T C C T G A A T G C A C T G G A C T A C T G T A C G A G T C A T C G T C A G T A G C
p-value:1e-74
log p-value:-1.717e+02
Information Content per bp:1.592
Number of Target Sequences with motif217.0
Percentage of Target Sequences with motif22.99%
Number of Background Sequences with motif2387.1
Percentage of Background Sequences with motif5.29%
Average Position of motif in Targets53.5 +/- 21.2bp
Average Position of motif in Background49.6 +/- 36.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.94
Offset:3
Orientation:forward strand
Alignment:SCNGSCACGTGCB
---NCCACGTG--
 A T C G A G T C T A G C T C A G A T G C A G T C C T G A A G T C A T C G A G C T A C T G A T G C A G T C
A C G T A C G T A C G T T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G A C G T A C G T

HEY1/MA0823.1/Jaspar

Match Rank:2
Score:0.94
Offset:3
Orientation:reverse strand
Alignment:SCNGSCACGTGCB
---GGCACGTGTC
 A T C G A G T C T A G C T C A G A T G C A G T C C T G A A G T C A T C G A G C T A C T G A T G C A G T C
A C G T A C G T A C G T A C T G T C A G G A T C T C G A A T G C A C T G A G C T T C A G A G C T A T G C

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.94
Offset:2
Orientation:forward strand
Alignment:SCNGSCACGTGCB
--NNCCACGTGG-
 A T C G A G T C T A G C T C A G A T G C A G T C C T G A A G T C A T C G A G C T A C T G A T G C A G T C
A C G T A C G T T C A G T C A G T A G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A C G T

MNT/MA0825.1/Jaspar

Match Rank:4
Score:0.93
Offset:3
Orientation:reverse strand
Alignment:SCNGSCACGTGCB
---NGCACGTGNT
 A T C G A G T C T A G C T C A G A T G C A G T C C T G A A G T C A T C G A G C T A C T G A T G C A G T C
A C G T A C G T A C G T C T A G A C T G G T A C G T C A A G T C T C A G C G A T C A T G A T C G G A C T

MAX/MA0058.3/Jaspar

Match Rank:5
Score:0.93
Offset:3
Orientation:reverse strand
Alignment:SCNGSCACGTGCB
---NNCACGTGGT
 A T C G A G T C T A G C T C A G A T G C A G T C C T G A A G T C A T C G A G C T A C T G A T G C A G T C
A C G T A C G T A C G T C T G A T A C G T G A C C T G A A G T C T C A G G A C T A C T G A C T G A C G T

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.93
Offset:2
Orientation:forward strand
Alignment:SCNGSCACGTGCB
--NNCCACGTGG-
 A T C G A G T C T A G C T C A G A T G C A G T C C T G A A G T C A T C G A G C T A C T G A T G C A G T C
A C G T A C G T T A C G T C G A T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.92
Offset:5
Orientation:reverse strand
Alignment:SCNGSCACGTGCB
-----CACGTGBN
 A T C G A G T C T A G C T C A G A T G C A G T C C T G A A G T C A T C G A G C T A C T G A T G C A G T C
A C G T A C G T A C G T A C G T A C G T G T A C C T G A A G T C C T A G G C A T C A T G A C G T G C T A

Hes1/MA1099.1/Jaspar

Match Rank:8
Score:0.92
Offset:3
Orientation:reverse strand
Alignment:SCNGSCACGTGCB
---NNCGCGTGNN
 A T C G A G T C T A G C T C A G A T G C A G T C C T G A A G T C A T C G A G C T A C T G A T G C A G T C
A C G T A C G T A C G T C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.92
Offset:3
Orientation:forward strand
Alignment:SCNGSCACGTGCB
---GNCACGTG--
 A T C G A G T C T A G C T C A G A T G C A G T C C T G A A G T C A T C G A G C T A C T G A T G C A G T C
A C G T A C G T A C G T C T A G C A G T T G A C C G T A G A T C T C A G G A C T C A T G A C G T A C G T

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.92
Offset:3
Orientation:forward strand
Alignment:SCNGSCACGTGCB--
---ACCACGTGGTNN
 A T C G A G T C T A G C T C A G A T G C A G T C C T G A A G T C A T C G A G C T A C T G A T G C A G T C A C G T A C G T
A C G T A C G T A C G T T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T A G T C G C A T