Information for 9-TWCAGCACTTTGGCCA (Motif 22)

A G C T C G T A G T A C C G T A T C A G A G T C C G T A G T A C A G C T C A G T A C G T A C T G C A T G A G T C G A T C C T G A
Reverse Opposite:
A G C T C A T G C T A G G T A C A G T C T G C A G T C A C T G A C A T G A C G T C T A G A G T C A C G T A C T G G C A T T C G A
p-value:1e-9
log p-value:-2.228e+01
Information Content per bp:1.679
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets48.8 +/- 24.3bp
Average Position of motif in Background40.6 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mafb/MA0117.2/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TWCAGCACTTTGGCCA
NGTCAGCANTTT-----
 A C G T A G C T C G T A G T A C C G T A T C A G A G T C C G T A G T A C A G C T C A G T A C G T A C T G C A T G A G T C G A T C C T G A
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T A C G T A C G T A C G T A C G T A C G T

REST/MA0138.2/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TWCAGCACTTTGGCCA-----
TTCAGCACCATGGACAGCGCC
 A G C T C G T A G T A C C G T A T C A G A G T C C G T A G T A C A G C T C A G T A C G T A C T G C A T G A G T C G A T C C T G A A C G T A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TWCAGCACTTTGGCCA-----
-TCAGCACCATGGACAGCTCC
 A G C T C G T A G T A C C G T A T C A G A G T C C G T A G T A C A G C T C A G T A C G T A C T G C A T G A G T C G A T C C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TWCAGCACTTTGGCCA
HWWGTCAGCAWWTTT----
 A C G T A C G T A C G T A G C T C G T A G T A C C G T A T C A G A G T C C G T A G T A C A G C T C A G T A C G T A C T G C A T G A G T C G A T C C T G A
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T A C G T A C G T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TWCAGCACTTTGGCCA
CTGAGTCAGCAATTT-----
 A C G T A C G T A C G T A C G T A G C T C G T A G T A C C G T A T C A G A G T C C G T A G T A C A G C T C A G T A C G T A C T G C A T G A G T C G A T C C T G A
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T A C G T A C G T A C G T A C G T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TWCAGCACTTTGGCCA
AAGTCAGCANTTTTN---
 A C G T A C G T A G C T C G T A G T A C C G T A T C A G A G T C C G T A G T A C A G C T C A G T A C G T A C T G C A T G A G T C G A T C C T G A
C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TWCAGCACTTTGGCCA
GTCAGCANNTN-----
 A G C T C G T A G T A C C G T A T C A G A G T C C G T A G T A C A G C T C A G T A C G T A C T G C A T G A G T C G A T C C T G A
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T A C G T A C G T A C G T A C G T

MAFF/MA0495.1/Jaspar

Match Rank:8
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----TWCAGCACTTTGGCCA
GCTGAGTCAGCAATTTTT---
 A C G T A C G T A C G T A C G T A C G T A G C T C G T A G T A C C G T A T C A G A G T C C G T A G T A C A G C T C A G T A C G T A C T G C A T G A G T C G A T C C T G A
A T C G G T A C G C A T C T A G C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T G A C T G C A T A C G T A C G T A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:9
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----TWCAGCACTTTGGCCA
NCTANGTCAGCAAATTT----
 A C G T A C G T A C G T A C G T A C G T A G C T C G T A G T A C C G T A T C A G A G T C C G T A G T A C A G C T C A G T A C G T A C T G C A T G A G T C G A T C C T G A
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TWCAGCACTTTGGCCA
--MRSCACTYAA----
 A G C T C G T A G T A C C G T A T C A G A G T C C G T A G T A C A G C T C A G T A C G T A C T G C A T G A G T C G A T C C T G A
A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T A C G T