Information for 2-CYCCTGCTGKGAN (Motif 2)

G A T C G A T C A G T C G T A C G A C T T C A G A T G C C G A T A C T G C A T G A T C G T G C A G A C T
Reverse Opposite:
C T A G A C G T T A G C G T A C A G T C C G T A A T C G A G T C C T G A A C T G A C T G C T A G C T A G
p-value:1e-67
log p-value:-1.549e+02
Information Content per bp:1.621
Number of Target Sequences with motif124.0
Percentage of Target Sequences with motif16.89%
Number of Background Sequences with motif229.3
Percentage of Background Sequences with motif2.24%
Average Position of motif in Targets48.0 +/- 23.8bp
Average Position of motif in Background53.3 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.94
Offset:-3
Orientation:forward strand
Alignment:---CYCCTGCTGKGAN
GGCCYCCTGCTGDGH-
 A C G T A C G T A C G T G A T C G A T C A G T C G T A C G A C T T C A G A T G C C G A T A C T G C A T G A T C G T G C A G A C T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-CYCCTGCTGKGAN
CCCCCTGCTGTG--
 A C G T G A T C G A T C A G T C G T A C G A C T T C A G A T G C C G A T A C T G C A T G A T C G T G C A G A C T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-CYCCTGCTGKGAN-
TCNCCTGCTGNGNNN
 A C G T G A T C G A T C A G T C G T A C G A C T T C A G A T G C C G A T A C T G C A T G A T C G T G C A G A C T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.91
Offset:2
Orientation:forward strand
Alignment:CYCCTGCTGKGAN
--CCTGCTGAGH-
 G A T C G A T C A G T C G T A C G A C T T C A G A T G C C G A T A C T G C A T G A T C G T G C A G A C T
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-CYCCTGCTGKGAN-
TNTCCTGCTGTGNNG
 A C G T G A T C G A T C A G T C G T A C G A C T T C A G A T G C C G A T A C T G C A T G A T C G T G C A G A C T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-CYCCTGCTGKGAN-
NNTCCTGCTGTGNNN
 A C G T G A T C G A T C A G T C G T A C G A C T T C A G A T G C C G A T A C T G C A T G A T C G T G C A G A C T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

ZIC1/MA0696.1/Jaspar

Match Rank:7
Score:0.79
Offset:-3
Orientation:forward strand
Alignment:---CYCCTGCTGKGAN
GACCCCCCGCTGTG--
 A C G T A C G T A C G T G A T C G A T C A G T C G T A C G A C T T C A G A T G C C G A T A C T G C A T G A T C G T G C A G A C T
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:8
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---CYCCTGCTGKGAN
GACCCCCCGCTGTGC-
 A C G T A C G T A C G T G A T C G A T C A G T C G T A C G A C T T C A G A T G C C G A T A C T G C A T G A T C G T G C A G A C T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:9
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---CYCCTGCTGKGAN
GACCCCCCGCTGCGC-
 A C G T A C G T A C G T G A T C G A T C A G T C G T A C G A C T T C A G A T G C C G A T A C T G C A T G A T C G T G C A G A C T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:10
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CYCCTGCTGKGAN
--CCAGCTGTTN-
 G A T C G A T C A G T C G T A C G A C T T C A G A T G C C G A T A C T G C A T G A T C G T G C A G A C T
A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A A C G T