Information for 17-AAAGACAATAAAC (Motif 12)

C G T A C G T A C G T A C A T G T C G A A G T C C G T A C G T A A C G T T C G A C T G A G T C A A G T C
Reverse Opposite:
C T A G A C G T A G C T A C G T C G T A C G A T A C G T A C T G A G C T G A T C G A C T A C G T A C G T
p-value:1e-12
log p-value:-2.882e+01
Information Content per bp:1.800
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.63%
Number of Background Sequences with motif7.9
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets56.5 +/- 27.8bp
Average Position of motif in Background35.4 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0074.1_Sox8_1/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--AAAGACAATAAAC--
TNNAGAACAATANATNN
 A C G T A C G T C G T A C G T A C G T A C A T G T C G A A G T C C G T A C G T A A C G T T C G A C T G A G T C A A G T C A C G T A C G T
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

PB0073.1_Sox7_1/Jaspar

Match Rank:2
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----AAAGACAATAAAC-----
AATAAAGAACAATAGAATTTCA
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A C A T G T C G A A G T C C G T A C G T A A C G T T C G A C T G A G T C A A G T C A C G T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

Sox17/MA0078.1/Jaspar

Match Rank:3
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:AAAGACAATAAAC
---GACAATGNN-
 C G T A C G T A C G T A C A T G T C G A A G T C C G T A C G T A A C G T T C G A C T G A G T C A A G T C
A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:4
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AAAGACAATAAAC-
TTTAGAACAATAAAAT
 A C G T A C G T C G T A C G T A C G T A C A T G T C G A A G T C C G T A C G T A A C G T T C G A C T G A G T C A A G T C A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0063.1_Sox13_1/Jaspar

Match Rank:5
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AAAGACAATAAAC-
TTAAGAACAATAAATT
 A C G T A C G T C G T A C G T A C G T A C A T G T C G A A G T C C G T A C G T A A C G T T C G A C T G A G T C A A G T C A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0062.1_Sox12_1/Jaspar

Match Rank:6
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---AAAGACAATAAAC
NTTNAGAACAATTA--
 A C G T A C G T A C G T C G T A C G T A C G T A C A T G T C G A A G T C C G T A C G T A A C G T T C G A C T G A G T C A A G T C
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:7
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AAAGACAATAAAC-
TCACGGAACAATAGGTG
 A C G T A C G T A C G T C G T A C G T A C G T A C A T G T C G A A G T C C G T A C G T A A C G T T C G A C T G A G T C A A G T C A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

PH0006.1_Barhl2/Jaspar

Match Rank:8
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AAAGACAATAAAC--
AAAAACCAATTAAGAA
 A C G T C G T A C G T A C G T A C A T G T C G A A G T C C G T A C G T A A C G T T C G A C T G A G T C A A G T C A C G T A C G T
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

PB0066.1_Sox17_1/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AAAGACAATAAAC--
ATAAACAATTAAACA
 C G T A C G T A C G T A C A T G T C G A A G T C C G T A C G T A A C G T T C G A C T G A G T C A A G T C A C G T A C G T
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A

Sox6/MA0515.1/Jaspar

Match Rank:10
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AAAGACAATAAAC
-AAAACAATGG--
 C G T A C G T A C G T A C A T G T C G A A G T C C G T A C G T A A C G T T C G A C T G A G T C A A G T C
A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T