Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-77 | -1.787e+02 | 0.0000 | 103.0 | 14.74% | 540.6 | 1.14% | motif file (matrix) |
svg |
2 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-71 | -1.650e+02 | 0.0000 | 138.0 | 19.74% | 1332.8 | 2.81% | motif file (matrix) |
svg |
3 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-63 | -1.459e+02 | 0.0000 | 103.0 | 14.74% | 763.0 | 1.61% | motif file (matrix) |
svg |
4 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-56 | -1.292e+02 | 0.0000 | 231.0 | 33.05% | 5070.8 | 10.68% | motif file (matrix) |
svg |
5 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-42 | -9.678e+01 | 0.0000 | 136.0 | 19.46% | 2332.0 | 4.91% | motif file (matrix) |
svg |
6 |
| TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer | 1e-41 | -9.666e+01 | 0.0000 | 50.0 | 7.15% | 211.0 | 0.44% | motif file (matrix) |
svg |
7 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-39 | -9.192e+01 | 0.0000 | 196.0 | 28.04% | 4772.5 | 10.05% | motif file (matrix) |
svg |
8 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-38 | -8.784e+01 | 0.0000 | 186.0 | 26.61% | 4486.9 | 9.45% | motif file (matrix) |
svg |
9 |
| Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-33 | -7.710e+01 | 0.0000 | 94.0 | 13.45% | 1385.3 | 2.92% | motif file (matrix) |
svg |
10 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-29 | -6.705e+01 | 0.0000 | 132.0 | 18.88% | 2960.2 | 6.23% | motif file (matrix) |
svg |
11 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-26 | -6.214e+01 | 0.0000 | 110.0 | 15.74% | 2264.3 | 4.77% | motif file (matrix) |
svg |
12 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-26 | -6.197e+01 | 0.0000 | 81.0 | 11.59% | 1275.4 | 2.69% | motif file (matrix) |
svg |
13 |
| Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer | 1e-26 | -6.002e+01 | 0.0000 | 67.0 | 9.59% | 896.5 | 1.89% | motif file (matrix) |
svg |
14 |
| Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer | 1e-23 | -5.463e+01 | 0.0000 | 76.0 | 10.87% | 1268.1 | 2.67% | motif file (matrix) |
svg |
15 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-22 | -5.281e+01 | 0.0000 | 91.0 | 13.02% | 1826.8 | 3.85% | motif file (matrix) |
svg |
16 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-22 | -5.258e+01 | 0.0000 | 55.0 | 7.87% | 685.7 | 1.44% | motif file (matrix) |
svg |
17 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-21 | -4.932e+01 | 0.0000 | 56.0 | 8.01% | 764.3 | 1.61% | motif file (matrix) |
svg |
18 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-19 | -4.554e+01 | 0.0000 | 184.0 | 26.32% | 6260.3 | 13.19% | motif file (matrix) |
svg |
19 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-17 | -4.108e+01 | 0.0000 | 300.0 | 42.92% | 13044.0 | 27.47% | motif file (matrix) |
svg |
20 |
| Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer | 1e-16 | -3.825e+01 | 0.0000 | 52.0 | 7.44% | 852.6 | 1.80% | motif file (matrix) |
svg |
21 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-15 | -3.562e+01 | 0.0000 | 233.0 | 33.33% | 9594.6 | 20.21% | motif file (matrix) |
svg |
22 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-14 | -3.438e+01 | 0.0000 | 81.0 | 11.59% | 2027.8 | 4.27% | motif file (matrix) |
svg |
23 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-12 | -2.976e+01 | 0.0000 | 112.0 | 16.02% | 3626.9 | 7.64% | motif file (matrix) |
svg |
24 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-10 | -2.428e+01 | 0.0000 | 154.0 | 22.03% | 6156.2 | 12.97% | motif file (matrix) |
svg |
25 |
| Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer | 1e-9 | -2.207e+01 | 0.0000 | 115.0 | 16.45% | 4268.6 | 8.99% | motif file (matrix) |
svg |
26 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-5 | -1.284e+01 | 0.0000 | 53.0 | 7.58% | 1811.8 | 3.82% | motif file (matrix) |
svg |
27 |
| Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer | 1e-4 | -1.074e+01 | 0.0003 | 46.0 | 6.58% | 1609.8 | 3.39% | motif file (matrix) |
svg |
28 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-4 | -9.801e+00 | 0.0007 | 94.0 | 13.45% | 4248.2 | 8.95% | motif file (matrix) |
svg |
29 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-4 | -9.255e+00 | 0.0012 | 60.0 | 8.58% | 2440.6 | 5.14% | motif file (matrix) |
svg |
30 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-3 | -8.687e+00 | 0.0020 | 48.0 | 6.87% | 1862.9 | 3.92% | motif file (matrix) |
svg |
31 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-3 | -8.587e+00 | 0.0022 | 64.0 | 9.16% | 2719.7 | 5.73% | motif file (matrix) |
svg |
32 |
| Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer | 1e-3 | -8.327e+00 | 0.0028 | 101.0 | 14.45% | 4836.2 | 10.19% | motif file (matrix) |
svg |
33 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-3 | -8.158e+00 | 0.0032 | 67.0 | 9.59% | 2928.8 | 6.17% | motif file (matrix) |
svg |
34 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-3 | -8.127e+00 | 0.0032 | 203.0 | 29.04% | 11084.9 | 23.35% | motif file (matrix) |
svg |
35 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-3 | -7.669e+00 | 0.0049 | 73.0 | 10.44% | 3318.2 | 6.99% | motif file (matrix) |
svg |
36 |
| Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer | 1e-3 | -7.602e+00 | 0.0051 | 51.0 | 7.30% | 2116.0 | 4.46% | motif file (matrix) |
svg |
37 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.047e+00 | 0.0086 | 13.0 | 1.86% | 310.5 | 0.65% | motif file (matrix) |
svg |
38 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-3 | -6.911e+00 | 0.0095 | 30.0 | 4.29% | 1088.6 | 2.29% | motif file (matrix) |
svg |
39 |
| Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer | 1e-2 | -6.799e+00 | 0.0104 | 79.0 | 11.30% | 3772.2 | 7.94% | motif file (matrix) |
svg |
40 |
| Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer | 1e-2 | -6.754e+00 | 0.0106 | 117.0 | 16.74% | 6027.1 | 12.69% | motif file (matrix) |
svg |
41 |
| PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer | 1e-2 | -6.701e+00 | 0.0109 | 17.0 | 2.43% | 490.2 | 1.03% | motif file (matrix) |
svg |
42 |
| Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-2 | -6.678e+00 | 0.0109 | 129.0 | 18.45% | 6769.1 | 14.26% | motif file (matrix) |
svg |
43 |
| Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer | 1e-2 | -6.339e+00 | 0.0150 | 107.0 | 15.31% | 5496.4 | 11.58% | motif file (matrix) |
svg |
44 |
| Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer | 1e-2 | -6.278e+00 | 0.0155 | 126.0 | 18.03% | 6660.4 | 14.03% | motif file (matrix) |
svg |
45 |
| Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-2 | -5.888e+00 | 0.0224 | 100.0 | 14.31% | 5153.0 | 10.85% | motif file (matrix) |
svg |
46 |
| RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer | 1e-2 | -5.594e+00 | 0.0294 | 34.0 | 4.86% | 1401.1 | 2.95% | motif file (matrix) |
svg |
47 |
| TATA-Box(TBP)/Promoter/Homer | 1e-2 | -5.407e+00 | 0.0347 | 76.0 | 10.87% | 3802.7 | 8.01% | motif file (matrix) |
svg |
48 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-2 | -5.311e+00 | 0.0374 | 47.0 | 6.72% | 2142.1 | 4.51% | motif file (matrix) |
svg |
49 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-2 | -5.152e+00 | 0.0430 | 45.0 | 6.44% | 2049.3 | 4.32% | motif file (matrix) |
svg |
50 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-2 | -4.792e+00 | 0.0604 | 15.0 | 2.15% | 499.0 | 1.05% | motif file (matrix) |
svg |
51 |
| ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer | 1e-2 | -4.669e+00 | 0.0669 | 41.0 | 5.87% | 1883.2 | 3.97% | motif file (matrix) |
svg |
52 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-2 | -4.634e+00 | 0.0680 | 91.0 | 13.02% | 4840.0 | 10.19% | motif file (matrix) |
svg |
53 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-2 | -4.630e+00 | 0.0680 | 49.0 | 7.01% | 2343.7 | 4.94% | motif file (matrix) |
svg |
54 |
| Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer | 1e-2 | -4.629e+00 | 0.0680 | 53.0 | 7.58% | 2574.9 | 5.42% | motif file (matrix) |
svg |