Information for 8-KCCTTTCAMA (Motif 7)

A C G T G A T C G T A C G C A T A G C T G C A T T A G C G C T A T G A C G T C A
Reverse Opposite:
A C G T A C T G C G A T A T C G C G T A C T G A C G T A C A T G C T A G T G C A
p-value:1e-16
log p-value:-3.703e+01
Information Content per bp:1.666
Number of Target Sequences with motif82.0
Percentage of Target Sequences with motif11.73%
Number of Background Sequences with motif1972.0
Percentage of Background Sequences with motif4.15%
Average Position of motif in Targets47.9 +/- 28.6bp
Average Position of motif in Background48.6 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----KCCTTTCAMA
NNGCACCTTTCTCC
 A C G T A C G T A C G T A C G T A C G T G A T C G T A C G C A T A G C T G C A T T A G C G C T A T G A C G T C A
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:KCCTTTCAMA-
--NATTCAAAT
 A C G T G A T C G T A C G C A T A G C T G C A T T A G C G C T A T G A C G T C A A C G T
A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.65
Offset:2
Orientation:forward strand
Alignment:KCCTTTCAMA--
--HTTTCCCASG
 A C G T G A T C G T A C G C A T A G C T G C A T T A G C G C T A T G A C G T C A A C G T A C G T
A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

TBR1/MA0802.1/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:KCCTTTCAMA---
---TTTCACACCT
 A C G T G A T C G T A C G C A T A G C T G C A T T A G C G C T A T G A C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T

PB0028.1_Hbp1_1/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----KCCTTTCAMA--
NNCATTCATTCATNNN
 A C G T A C G T A C G T A C G T A C G T G A T C G T A C G C A T A G C T G C A T T A G C G C T A T G A C G T C A A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:KCCTTTCAMA
CGGTTTCAAA
 A C G T G A T C G T A C G C A T A G C T G C A T T A G C G C T A T G A C G T C A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A

TATA-Box(TBP)/Promoter/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:KCCTTTCAMA---
-CCTTTTATAGNC
 A C G T G A T C G T A C G C A T A G C T G C A T T A G C G C T A T G A C G T C A A C G T A C G T A C G T
A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

PB0170.1_Sox17_2/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---KCCTTTCAMA----
GACCACATTCATACAAT
 A C G T A C G T A C G T A C G T G A T C G T A C G C A T A G C T G C A T T A G C G C T A T G A C G T C A A C G T A C G T A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

TBX21/MA0690.1/Jaspar

Match Rank:9
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:KCCTTTCAMA----
----TTCACACCTT
 A C G T G A T C G T A C G C A T A G C T G C A T T A G C G C T A T G A C G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T

TBX20/MA0689.1/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:KCCTTTCAMA----
---CTTCACACCTA
 A C G T G A T C G T A C G C A T A G C T G C A T T A G C G C T A T G A C G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A