Information for 4-CCTTTTCACCAGCACA (Motif 5)

A G T C G T A C A C G T A C G T G A C T A C G T A G T C C G T A A G T C A T G C C G T A A C T G A G T C G T C A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C T G A G T C C G A T A T C G C T A G A C G T A C T G C G T A C G T A G T C A C G T A A C T G C T A G
p-value:1e-16
log p-value:-3.810e+01
Information Content per bp:1.907
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.4 +/- 24.9bp
Average Position of motif in Background47.2 +/- 7.5bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:1
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CCTTTTCACCAGCACA
-SCTGTCARCACC---
 A G T C G T A C A C G T A C G T G A C T A C G T A G T C C G T A A G T C A T G C C G T A A C T G A G T C G T C A A G T C C G T A
A C G T T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T A C G T A C G T

Rarg/MA0859.1/Jaspar

Match Rank:2
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CCTTTTCACCAGCACA
TTGACCTTTTGACCTT----
 A C G T A C G T A C G T A C G T A G T C G T A C A C G T A C G T G A C T A C G T A G T C C G T A A G T C A T G C C G T A A C T G A G T C G T C A A G T C C G T A
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T A C G T A C G T A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:3
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CCTTTTCACCAGCACA
--NTTTTACGAGN---
 A G T C G T A C A C G T A C G T G A C T A C G T A G T C C G T A A G T C A T G C C G T A A C T G A G T C G T C A A G T C C G T A
A C G T A C G T C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T A C G T A C G T

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:4
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CCTTTTCACCAGCACA
TGACCTTTTGACCTC----
 A C G T A C G T A C G T A G T C G T A C A C G T A C G T G A C T A C G T A G T C C G T A A G T C A T G C C G T A A C T G A G T C G T C A A G T C C G T A
A G C T C T A G C G T A G T A C A G T C A C G T G A C T G C A T C A G T T C A G G T C A A G T C A G T C G A C T A G T C A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CCTTTTCACCAGCACA
---SNGCACCTGCHS-
 A G T C G T A C A C G T A C G T G A C T A C G T A G T C C G T A A G T C A T G C C G T A A C T G A G T C G T C A A G T C C G T A
A C G T A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:6
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CCTTTTCACCAGCACA
YCTTATCTBN------
 A G T C G T A C A C G T A C G T G A C T A C G T A G T C C G T A A G T C A T G C C G T A A C T G A G T C G T C A A G T C C G T A
A G C T A T G C G A C T G C A T C G T A A G C T G T A C C G A T A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:7
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CCTTTTCACCAGCACA
YCTTATCWVN------
 A G T C G T A C A C G T A C G T G A C T A C G T A G T C C G T A A G T C A T G C C G T A A C T G A G T C G T C A A G T C C G T A
A G C T A T G C G A C T G C A T C G T A A C G T A G T C C G A T T A C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:8
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CCTTTTCACCAGCACA
NCCTTATCTG-------
 A C G T A G T C G T A C A C G T A C G T G A C T A C G T A G T C C G T A A G T C A T G C C G T A A C T G A G T C G T C A A G T C C G T A
A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CCTTTTCACCAGCACA
-ATTAACACCT-----
 A G T C G T A C A C G T A C G T G A C T A C G T A G T C C G T A A G T C A T G C C G T A A C T G A G T C G T C A A G T C C G T A
A C G T G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T

Rarb/MA0857.1/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---CCTTTTCACCAGCACA
TGACCTTTTGACCTTT---
 A C G T A C G T A C G T A G T C G T A C A C G T A C G T G A C T A C G T A G T C C G T A A G T C A T G C C G T A A C T G A G T C G T C A A G T C C G T A
G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T A C G T A C G T A C G T