p-value: | 1e-5 |
log p-value: | -1.239e+01 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 0.43% |
Number of Background Sequences with motif | 2.2 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 28.0 +/- 12.8bp |
Average Position of motif in Background | 57.7 +/- 2.1bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer
Match Rank: | 1 |
Score: | 0.66 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TGCAGACCAT-- ATTTGCATACAATGG |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 2 |
Score: | 0.63 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TGCAGACCAT -BCAGACWA- |
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NRL/MA0842.1/Jaspar
Match Rank: | 3 |
Score: | 0.62 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----TGCAGACCAT AATTTGCTGAC--- |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 4 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TGCAGACCAT- -CCAGACRSVB |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 5 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TGCAGACCAT -CCAGACAG- |
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Hand1::Tcf3/MA0092.1/Jaspar
Match Rank: | 6 |
Score: | 0.58 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TGCAGACCAT ATGCCAGACN-- |
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PB0041.1_Mafb_1/Jaspar
Match Rank: | 7 |
Score: | 0.58 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----TGCAGACCAT-- AAATTTGCTGACTTAGA |
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Mafb/MA0117.2/Jaspar
Match Rank: | 8 |
Score: | 0.57 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----TGCAGACCAT AAAATGCTGACT-- |
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PB0044.1_Mtf1_1/Jaspar
Match Rank: | 9 |
Score: | 0.57 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TGCAGACCAT-- NNTTTGCACACGGCCC |
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MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer
Match Rank: | 10 |
Score: | 0.56 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----TGCAGACCAT AAAWWTGCTGACWWD |
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