Information for 22-GGAACAAATCCCC (Motif 29)

C T A G A C T G C G T A C G T A A T G C G C T A C G T A G T C A A C G T G T A C G A T C G T A C A T G C
Reverse Opposite:
A T C G A C T G C T A G A C T G C G T A A C G T A C G T C A G T A T C G A C G T G A C T A G T C A G T C
p-value:1e-7
log p-value:-1.822e+01
Information Content per bp:1.774
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif10.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets60.8 +/- 20.5bp
Average Position of motif in Background47.9 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1/MA0038.1/Jaspar

Match Rank:1
Score:0.63
Offset:4
Orientation:forward strand
Alignment:GGAACAAATCCCC-
----CAAATCACTG
 C T A G A C T G C G T A C G T A A T G C G C T A C G T A G T C A A C G T G T A C G A T C G T A C A T G C A C G T
A C G T A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

PH0129.1_Otx1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGAACAAATCCCC---
NNNAATTAATCCCCNCN
 A C G T C T A G A C T G C G T A C G T A A T G C G C T A C G T A G T C A A C G T G T A C G A T C G T A C A T G C A C G T A C G T A C G T
T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T

Crx/MA0467.1/Jaspar

Match Rank:3
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GGAACAAATCCCC--
----CTAATCCTCTT
 C T A G A C T G C G T A C G T A A T G C G C T A C G T A G T C A A C G T G T A C G A T C G T A C A T G C A C G T A C G T
A C G T A C G T A C G T A C G T G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:4
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GGAACAAATCCCC
----YTAATCCY-
 C T A G A C T G C G T A C G T A A T G C G C T A C G T A G T C A A C G T G T A C G A T C G T A C A T G C
A C G T A C G T A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGAACAAATCCCC--
GNNAGCTAATCCCCCN
 A C G T C T A G A C T G C G T A C G T A A T G C G C T A C G T A G T C A A C G T G T A C G A T C G T A C A T G C A C G T A C G T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

PITX3/MA0714.1/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GGAACAAATCCCC
---CTTAATCCC-
 C T A G A C T G C G T A C G T A A T G C G C T A C G T A G T C A A C G T G T A C G A T C G T A C A T G C
A C G T A C G T A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GGAACAAATCCCC---
----SSAATCCACANN
 C T A G A C T G C G T A C G T A A T G C G C T A C G T A G T C A A C G T G T A C G A T C G T A C A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

PH0037.1_Hdx/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGAACAAATCCCC---
AAGGCGAAATCATCGCA
 A C G T C T A G A C T G C G T A C G T A A T G C G C T A C G T A G T C A A C G T G T A C G A T C G T A C A T G C A C G T A C G T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

GSC/MA0648.1/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GGAACAAATCCCC
---GCTAATCCCC
 C T A G A C T G C G T A C G T A A T G C G C T A C G T A G T C A A C G T G T A C G A T C G T A C A T G C
A C G T A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

PH0138.1_Pitx2/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGAACAAATCCCC---
GNNNATTAATCCCTNCN
 A C G T C T A G A C T G C G T A C G T A A T G C G C T A C G T A G T C A A C G T G T A C G A T C G T A C A T G C A C G T A C G T A C G T
C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A