Information for 13-GATAGTAACT (Motif 37)

A C T G G T C A A C G T C G T A A C T G A C G T C G T A C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A C G T C G T A A G T C A C G T C G T A A C G T A G T C
p-value:1e-6
log p-value:-1.449e+01
Information Content per bp:1.959
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.0 +/- 17.7bp
Average Position of motif in Background53.6 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GATAGTAACT-
SCCTAGCAACAG
 A C G T A C T G G T C A A C G T C G T A A C T G A C G T C G T A C G T A A G T C A C G T A C G T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:2
Score:0.63
Offset:-7
Orientation:forward strand
Alignment:-------GATAGTAACT---
NNNNNBAGATAWYATCTVHN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T C A A C G T C G T A A C T G A C G T C G T A C G T A A G T C A C G T A C G T A C G T A C G T
C T G A C T G A C T A G T C G A C G T A A T G C C G T A A C T G C G T A A C G T C T G A C G A T A G C T C G T A A C G T A G T C C G A T T A C G G T C A G C A T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GATAGTAACT--
CCGCATAGCAACGGA
 A C G T A C G T A C G T A C T G G T C A A C G T C G T A A C T G A C G T C G T A C G T A A G T C A C G T A C G T A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

PB0115.1_Ehf_2/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GATAGTAACT----
AAGATCGGAANTNNNA
 A C G T A C G T A C T G G T C A A C G T C G T A A C T G A C G T C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T
C G T A G C T A A T C G C G T A C G A T T G A C C A T G C T A G C G T A C G T A T G C A G A C T G T C A A G T C G C A T G C T A

HMBOX1/MA0895.1/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GATAGTAACT---
---GTTAACTAGN
 A C T G G T C A A C G T C G T A A C T G A C G T C G T A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T

PB0125.1_Gata3_2/Jaspar

Match Rank:6
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------GATAGTAACT------
NNNNNCGATANNATCTNNNNAN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T C A A C G T C G T A A C T G A C G T C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C G T A C G T A T A C G A G C T G A T C C T A G T C G A A G C T C T G A T G C A C G T A C T G A C A G T G A T C C G A T T C G A A G T C G C T A C G T A T G C A C T G A

PH0040.1_Hmbox1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GATAGTAACT-------
GANGTTAACTAGTTTNN
 A C T G G T C A A C G T C G T A A C T G A C G T C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GATAGTAACT---
ADGGYAGYAGCATCT
 A C G T A C G T A C T G G T C A A C G T C G T A A C T G A C G T C G T A C G T A A G T C A C G T A C G T A C G T A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

PB0159.1_Rfx4_2/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GATAGTAACT------
-NNNGTAACTANGNNA
 A C T G G T C A A C G T C G T A A C T G A C G T C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A

PB0055.1_Rfx4_1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GATAGTAACT--
TACCATAGCAACGGT
 A C G T A C G T A C G T A C T G G T C A A C G T C G T A A C T G A C G T C G T A C G T A A G T C A C G T A C G T A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T