Information for 21-CAKKGGCTACTGK (Motif 34)

A G T C C G T A A C G T A C G T A C T G A T C G A T G C A G C T T C G A A G T C A C G T C T A G A C T G
Reverse Opposite:
T G A C A G T C C G T A A C T G A C G T C T G A A T C G A T G C A G T C T G C A G T C A A C G T C T A G
p-value:1e-7
log p-value:-1.654e+01
Information Content per bp:1.743
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.70%
Number of Background Sequences with motif103.4
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets46.1 +/- 20.4bp
Average Position of motif in Background50.1 +/- 24.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0051.1_Osr2_1/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CAKKGGCTACTGK----
-CNNNGCTACTGTANNN
 A G T C C G T A A C G T A C G T A C T G A T C G A T G C A G C T T C G A A G T C A C G T C T A G A C T G A C G T A C G T A C G T A C G T
A C G T G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

PB0050.1_Osr1_1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CAKKGGCTACTGK----
-TNNTGCTACTGTNNNN
 A G T C C G T A A C G T A C G T A C T G A T C G A T G C A G C T T C G A A G T C A C G T C T A G A C T G A C G T A C G T A C G T A C G T
A C G T G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CAKKGGCTACTGK
TGATTGGCTANN--
 A C G T A G T C C G T A A C G T A C G T A C T G A T C G A T G C A G C T T C G A A G T C A C G T C T A G A C T G
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CAKKGGCTACTGK
CCGATTGGCT-----
 A C G T A C G T A G T C C G T A A C G T A C G T A C T G A T C G A T G C A G C T T C G A A G T C A C G T C T A G A C T G
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.55
Offset:8
Orientation:forward strand
Alignment:CAKKGGCTACTGK-
--------GCTGTG
 A G T C C G T A A C G T A C G T A C T G A T C G A T G C A G C T T C G A A G T C A C G T C T A G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

PB0003.1_Ascl2_1/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CAKKGGCTACTGK----
NNNNAGCAGCTGCTGAN
 A G T C C G T A A C G T A C G T A C T G A T C G A T G C A G C T T C G A A G T C A C G T C T A G A C T G A C G T A C G T A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CAKKGGCTACTGK---
-AGATGCTRCTRCCHT
 A G T C C G T A A C G T A C G T A C T G A T C G A T G C A G C T T C G A A G T C A C G T C T A G A C T G A C G T A C G T A C G T
A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

PB0099.1_Zfp691_1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CAKKGGCTACTGK---
NNNNTGAGCACTGTNNG
 A C G T A G T C C G T A A C G T A C G T A C T G A T C G A T G C A G C T T C G A A G T C A C G T C T A G A C T G A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

NFYB/MA0502.1/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CAKKGGCTACTGK
CTGATTGGTCNATTT
 A C G T A C G T A G T C C G T A A C G T A C G T A C T G A T C G A T G C A G C T T C G A A G T C A C G T C T A G A C T G
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CAKKGGCTACTGK
ACAAAGGNBCCT--
 A C G T A G T C C G T A A C G T A C G T A C T G A T C G A T G C A G C T T C G A A G T C A C G T C T A G A C T G
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T A C G T