p-value: | 1e-7 |
log p-value: | -1.734e+01 |
Information Content per bp: | 1.947 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.57% |
Number of Background Sequences with motif | 2.4 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 53.5 +/- 23.2bp |
Average Position of motif in Background | 43.8 +/- 24.7bp |
Strand Bias (log2 ratio + to - strand density) | 1.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer
Match Rank: | 1 |
Score: | 0.64 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GATGTCACTGAAC- NAGGTCANTGACCT |
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Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer
Match Rank: | 2 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GATGTCACTGAAC NCTGTCAATCAN- |
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Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer
Match Rank: | 3 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GATGTCACTGAAC SCTGTCAVTCAV- |
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PB0091.1_Zbtb3_1/Jaspar
Match Rank: | 4 |
Score: | 0.60 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GATGTCACTGAAC---- AATCGCACTGCATTCCG |
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MEIS3/MA0775.1/Jaspar
Match Rank: | 5 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GATGTCACTGAAC CCTGTCAA----- |
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PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer
Match Rank: | 6 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GATGTCACTGAAC GSCTGTCACTCA-- |
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PB0005.1_Bbx_1/Jaspar
Match Rank: | 7 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GATGTCACTGAAC-- TAATTCAATGAAGTG |
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JUN/MA0488.1/Jaspar
Match Rank: | 8 |
Score: | 0.58 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----GATGTCACTGAAC AAGATGATGTCAT----- |
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PB0004.1_Atf1_1/Jaspar
Match Rank: | 9 |
Score: | 0.58 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----GATGTCACTGAAC ACGATGACGTCATCGA-- |
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Pax2/MA0067.1/Jaspar
Match Rank: | 10 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GATGTCACTGAAC --AGTCACGC--- |
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