Information for 9-GAACARMCCTTKT (Motif 22)

A C T G C T G A C G T A G T A C C G T A C T G A G T C A G T A C A G T C A C G T A C G T A C G T A G C T
Reverse Opposite:
C T G A G T C A C G T A C G T A A C T G A C T G A C G T A G C T A C G T A C T G A C G T A G C T A G T C
p-value:1e-9
log p-value:-2.249e+01
Information Content per bp:1.825
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.6 +/- 24.1bp
Average Position of motif in Background18.0 +/- 15.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HLTF/MA0109.1/Jaspar

Match Rank:1
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GAACARMCCTTKT--
-----AACCTTATAT
 A C T G C T G A C G T A G T A C C G T A C T G A G T C A G T A C A G T C A C G T A C G T A C G T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GAACARMCCTTKT
CCAGGAACAG-------
 A C G T A C G T A C G T A C G T A C T G C T G A C G T A G T A C C G T A C T G A G T C A G T A C A G T C A C G T A C G T A C G T A G C T
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:3
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GAACARMCCTTKT------
---GAGCCCTTGTCCCTAA
 A C T G C T G A C G T A G T A C C G T A C T G A G T C A G T A C A G T C A C G T A C G T A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

MYF6/MA0667.1/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GAACARMCCTTKT
-AACAGCTGTT--
 A C T G C T G A C G T A G T A C C G T A C T G A G T C A G T A C A G T C A C G T A C G T A C G T A G C T
A C G T T C G A T C G A A G T C T C G A T C A G A G T C C G A T A T C G G A C T A G C T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GAACARMCCTTKT
TGGAACAGMA-----
 A C G T A C G T A C T G C T G A C G T A G T A C C G T A C T G A G T C A G T A C A G T C A C G T A C G T A C G T A G C T
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T A C G T A C G T A C G T

Tcf21/MA0832.1/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GAACARMCCTTKT
NCAACAGCTGTTGC
 A C G T A C T G C T G A C G T A G T A C C G T A C T G A G T C A G T A C A G T C A C G T A C G T A C G T A G C T
T C G A A G T C C T G A T G C A A G T C C G T A T A C G G T A C A C G T A C T G A C G T G A C T C T A G A G T C

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GAACARMCCTTKT--
GVACAGNMTGTYCTB
 A C T G C T G A C G T A G T A C C G T A C T G A G T C A G T A C A G T C A C G T A C G T A C G T A G C T A C G T A C G T
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GAACARMCCTTKT--
GRACAGWMTGTYCTB
 A C T G C T G A C G T A G T A C C G T A C T G A G T C A G T A C A G T C A C G T A C G T A C G T A G C T A C G T A C G T
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

MSC/MA0665.1/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GAACARMCCTTKT
-AACAGCTGTT--
 A C T G C T G A C G T A G T A C C G T A C T G A G T C A G T A C A G T C A C G T A C G T A C G T A G C T
A C G T T C G A T C G A G T A C C G T A A T C G A T G C A C G T T A C G A C G T G A C T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:10
Score:0.51
Offset:4
Orientation:forward strand
Alignment:GAACARMCCTTKT---
----TGACCTTTNCNT
 A C T G C T G A C G T A G T A C C G T A C T G A G T C A G T A C A G T C A C G T A C G T A C G T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T