Information for 2-TTCAAAGGTCWATGTG (Motif 3)

A C G T G A C T A G T C C G T A G T C A C G T A T C A G T C A G A G C T G T A C G C A T G T C A A C G T T A C G G C A T C T A G
Reverse Opposite:
A G T C C G T A A T G C T G C A A C G T C G T A C A T G C T G A A G T C A G T C G C A T C A G T C G A T T C A G C G T A G T C A
p-value:1e-10
log p-value:-2.360e+01
Information Content per bp:1.618
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif6.33%
Number of Background Sequences with motif144.7
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets53.7 +/- 22.1bp
Average Position of motif in Background46.9 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXRG/MA0856.1/Jaspar

Match Rank:1
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TTCAAAGGTCWATGTG
GGGGTCAAAGGTCA-----
 A C G T A C G T A C G T A C G T G A C T A G T C C G T A G T C A C G T A T C A G T C A G A G C T G T A C G C A T G T C A A C G T T A C G G C A T C T A G
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A A C G T A C G T A C G T A C G T A C G T

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:2
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TTCAAAGGTCWATGTG
AAAGGTCAAAGGTCAAC---
 A C G T A C G T A C G T A C G T A C G T G A C T A G T C C G T A G T C A C G T A T C A G T C A G A G C T G T A C G C A T G T C A A C G T T A C G G C A T C T A G
G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C A C G T A C G T A C G T

Rxra/MA0512.2/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TTCAAAGGTCWATGTG
GGGGTCAAAGGTCA-----
 A C G T A C G T A C G T A C G T G A C T A G T C C G T A G T C A C G T A T C A G T C A G A G C T G T A C G C A T G T C A A C G T T A C G G C A T C T A G
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A A C G T A C G T A C G T A C G T A C G T

RXRB/MA0855.1/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TTCAAAGGTCWATGTG
GGGGTCAAAGGTCA-----
 A C G T A C G T A C G T A C G T G A C T A G T C C G T A G T C A C G T A T C A G T C A G A G C T G T A C G C A T G T C A A C G T T A C G G C A T C T A G
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A A C G T A C G T A C G T A C G T A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TTCAAAGGTCWATGTG
GAGGTCAAAGGTCA-----
 A C G T A C G T A C G T A C G T G A C T A G T C C G T A G T C A C G T A T C A G T C A G A G C T G T A C G C A T G T C A A C G T T A C G G C A T C T A G
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TTCAAAGGTCWATGTG
TCTCAAAGGTCACCTG-
 A C G T A C G T G A C T A G T C C G T A G T C A C G T A T C A G T C A G A G C T G T A C G C A T G T C A A C G T T A C G G C A T C T A G
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TTCAAAGGTCWATGTG
ACATCAAAGG--------
 A C G T A C G T A C G T G A C T A G T C C G T A G T C A C G T A T C A G T C A G A G C T G T A C G C A T G T C A A C G T T A C G G C A T C T A G
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TTCAAAGGTCWATGTG
TCTCAAAGGTCACGAG-
 A C G T A C G T G A C T A G T C C G T A G T C A C G T A T C A G T C A G A G C T G T A C G C A T G T C A A C G T T A C G G C A T C T A G
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TTCAAAGGTCWATGTG
ACWTCAAAGG--------
 A C G T A C G T A C G T G A C T A G T C C G T A G T C A C G T A T C A G T C A G A G C T G T A C G C A T G T C A A C G T T A C G G C A T C T A G
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TTCAAAGGTCWATGTG
ANGNAAAGGTCA-----
 A C G T A C G T G A C T A G T C C G T A G T C A C G T A T C A G T C A G A G C T G T A C G C A T G T C A A C G T T A C G G C A T C T A G
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T