Information for 24-GGACCCGGTCACC (Motif 39)

A C T G C T A G T C G A G T A C A G T C A G T C T C A G C T A G C G A T T A G C G T C A G T A C A G T C
Reverse Opposite:
C T A G A C T G A C G T A T C G C G T A A G T C A G T C A C T G T A C G A C T G A C G T A G T C T A G C
p-value:1e-6
log p-value:-1.544e+01
Information Content per bp:1.703
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif54.7
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets48.7 +/- 28.2bp
Average Position of motif in Background51.7 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GGACCCGGTCACC---
TGACCCAGTGACCTAC
 A C T G C T A G T C G A G T A C A G T C A G T C T C A G C T A G C G A T T A G C G T C A G T A C A G T C A C G T A C G T A C G T
G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

RXRA::VDR/MA0074.1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GGACCCGGTCACC-
TGAACCCGATGACCC
 A C G T A C T G C T A G T C G A G T A C A G T C A G T C T C A G C T A G C G A T T A G C G T C A G T A C A G T C A C G T
A G C T C T A G C G T A C G T A A G T C A G C T A G T C A C T G C G A T A G C T C T A G C G T A G T A C A G T C A G T C

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:3
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GGACCCGGTCACC---
NNNTGAACTCNNTGACCTCN
 A C G T A C G T A C G T A C G T A C T G C T A G T C G A G T A C A G T C A G T C T C A G C T A G C G A T T A G C G T C A G T A C A G T C A C G T A C G T A C G T
G T A C G A T C G T C A G C A T T C A G G T C A G T C A G T A C A G C T A G T C C G T A T A C G G C A T T A C G T G C A G T A C G A T C G A C T A G T C G A C T

ESR2/MA0258.2/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGACCCGGTCACC-
AGGNCANNGTGACCT
 A C G T A C T G C T A G T C G A G T A C A G T C A G T C T C A G C T A G C G A T T A G C G T C A G T A C A G T C A C G T
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GGACCCGGTCACC
NNNNTGACCCGGCGCG-
 A C G T A C G T A C G T A C G T A C T G C T A G T C G A G T A C A G T C A G T C T C A G C T A G C G A T T A G C G T C A G T A C A G T C
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G A C G T

ESR1/MA0112.3/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGACCCGGTCACC--
AAGGTCACGGTGACCTG
 A C G T A C G T A C T G C T A G T C G A G T A C A G T C A G T C T C A G C T A G C G A T T A G C G T C A G T A C A G T C A C G T A C G T
C T G A T C G A A C T G C T A G A C G T G A T C C T G A T G A C T A C G T C A G A G C T C T A G T C G A A T G C G T A C A G C T A C T G

PH0026.1_Duxbl/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGACCCGGTCACC----
CGACCCAATCAACGGTG
 A C T G C T A G T C G A G T A C A G T C A G T C T C A G C T A G C G A T T A G C G T C A G T A C A G T C A C G T A C G T A C G T A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

Vdr/MA0693.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGACCCGGTCACC--
TGAACTCNATGAACTC
 A C G T A C T G C T A G T C G A G T A C A G T C A G T C T C A G C T A G C G A T T A G C G T C A G T A C A G T C A C G T A C G T
G A C T T C A G T G C A T G C A G A T C A G C T A G T C C T G A C T G A G A C T T C A G T G C A T G C A G T A C A G C T A G T C

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGACCCGGTCACC--
GGTCANNGTGACCTN
 A C T G C T A G T C G A G T A C A G T C A G T C T C A G C T A G C G A T T A G C G T C A G T A C A G T C A C G T A C G T
C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

PPARG/MA0066.1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GGACCCGGTCACC----
GTAGGTCACGGTGACCTACT
 A C G T A C G T A C G T A C T G C T A G T C G A G T A C A G T C A G T C T C A G C T A G C G A T T A G C G T C A G T A C A G T C A C G T A C G T A C G T A C G T
A T C G C G A T C T G A A T C G C A T G A C G T T A G C G C T A G T A C A T C G C A T G C A G T T A C G G T C A G T A C A G T C G A C T G T C A A T G C C G A T