Information for 2-TGWWAATGAGSTGHTA (Motif 3)

C G A T A T C G G C T A C G A T C T G A C G T A A C G T A C T G C T G A C T A G A T G C A C G T T C A G G A C T A C G T C T G A
Reverse Opposite:
G A C T T G C A C T G A A G T C G T C A T A C G G A T C A G C T T G A C C G T A C G A T A G C T G C T A C G A T A T G C C G T A
p-value:1e-33
log p-value:-7.680e+01
Information Content per bp:1.638
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif5.43%
Number of Background Sequences with motif155.6
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets56.1 +/- 21.2bp
Average Position of motif in Background53.4 +/- 32.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TGWWAATGAGSTGHTA
WATGCAAATGAG------
 A C G T A C G T C G A T A T C G G C T A C G A T C T G A C G T A A C G T A C T G C T G A C T A G A T G C A C G T T C A G G A C T A C G T C T G A
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TGWWAATGAGSTGHTA
TATGCWAATBAV------
 A C G T A C G T C G A T A T C G G C T A C G A T C T G A C G T A A C G T A C T G C T G A C T A G A T G C A C G T T C A G G A C T A C G T C T G A
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

POU1F1/MA0784.1/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----TGWWAATGAGSTGHTA
AATATGCAAATTAG------
 A C G T A C G T A C G T A C G T C G A T A T C G G C T A C G A T C T G A C G T A A C G T A C T G C T G A C T A G A T G C A C G T T C A G G A C T A C G T C T G A
C G T A C G T A C G A T C T G A G A C T C A T G A G T C G C T A C G T A G T C A C G A T A C G T C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TGWWAATGAGSTGHTA
GACGATAATGAGCTTGC-
 A C G T A C G T C G A T A T C G G C T A C G A T C T G A C G T A A C G T A C T G C T G A C T A G A T G C A C G T T C A G G A C T A C G T C T G A
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C A C G T

POU6F2/MA0793.1/Jaspar

Match Rank:5
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TGWWAATGAGSTGHTA
--NTAATGAGCT----
 C G A T A T C G G C T A C G A T C T G A C G T A A C G T A C T G C T G A C T A G A T G C A C G T T C A G G A C T A C G T C T G A
A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T A C G T A C G T A C G T A C G T

POU3F2/MA0787.1/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TGWWAATGAGSTGHTA
TTATGCAAATTA-------
 A C G T A C G T A C G T C G A T A T C G G C T A C G A T C T G A C G T A A C G T A C T G C T G A C T A G A T G C A C G T T C A G G A C T A C G T C T G A
C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TGWWAATGAGSTGHTA
TTATGCAAATTA-------
 A C G T A C G T A C G T C G A T A T C G G C T A C G A T C T G A C G T A A C G T A C T G C T G A C T A G A T G C A C G T T C A G G A C T A C G T C T G A
C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGWWAATGAGSTGHTA
AAACATAATGAGGTTGC-
 A C G T A C G T C G A T A T C G G C T A C G A T C T G A C G T A A C G T A C T G C T G A C T A G A T G C A C G T T C A G G A C T A C G T C T G A
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:9
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TGWWAATGAGSTGHTA
TTGTATGCAAATTAGA-----
 A C G T A C G T A C G T A C G T A C G T C G A T A T C G G C T A C G A T C T G A C G T A A C G T A C T G C T G A C T A G A T G C A C G T T C A G G A C T A C G T C T G A
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A A C G T A C G T A C G T A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:10
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TGWWAATGAGSTGHTA
TTGTATGCAAATTAGA-----
 A C G T A C G T A C G T A C G T A C G T C G A T A T C G G C T A C G A T C T G A C G T A A C G T A C T G C T G A C T A G A T G C A C G T T C A G G A C T A C G T C T G A
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T A C G T A C G T A C G T A C G T