Information for 17-GCCAGMAACCCAT (Motif 29)

A C T G A G T C A G T C C G T A A C T G G T A C C G T A T G C A A T G C G T A C G T A C G T C A C A G T
Reverse Opposite:
G T C A A C G T A C T G A C T G T A C G A C G T A C G T A C T G A G T C C G A T A C T G A C T G A G T C
p-value:1e-9
log p-value:-2.267e+01
Information Content per bp:1.793
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif9.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets57.1 +/- 26.2bp
Average Position of motif in Background55.0 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GCCAGMAACCCAT
ATGCCAGACN-----
 A C G T A C G T A C T G A G T C A G T C C G T A A C T G G T A C C G T A T G C A A T G C G T A C G T A C G T C A C A G T
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGMAACCCAT
TGCCAA--------
 A C G T A C T G A G T C A G T C C G T A A C T G G T A C C G T A T G C A A T G C G T A C G T A C G T C A C A G T
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GCCAGMAACCCAT
CGTGCCAAG-------
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C T G G T A C C G T A T G C A A T G C G T A C G T A C G T C A C A G T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GCCAGMAACCCAT
ATTTCCCAGVAKSCY--
 A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C T G G T A C C G T A T G C A A T G C G T A C G T A C G T C A C A G T
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCCAGMAACCCAT
CTGCCCGCA------
 A C G T A C G T A C T G A G T C A G T C C G T A A C T G G T A C C G T A T G C A A T G C G T A C G T A C G T C A C A G T
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GCCAGMAACCCAT
TGAGTCAGCA------
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C T G G T A C C G T A T G C A A T G C G T A C G T A C G T C A C A G T
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGMAACCCAT-
TGCCTGCGYCMCCTT
 A C G T A C T G A G T C A G T C C G T A A C T G G T A C C G T A T G C A A T G C G T A C G T A C G T C A C A G T A C G T
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCCAGMAACCCAT
TTGCCAAG-------
 A C G T A C G T A C T G A G T C A G T C C G T A A C T G G T A C C G T A T G C A A T G C G T A C G T A C G T C A C A G T
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GCCAGMAACCCAT
ATGCCAACC------
 A C G T A C G T A C T G A G T C A G T C C G T A A C T G G T A C C G T A T G C A A T G C G T A C G T A C G T C A C A G T
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GCCAGMAACCCAT
TGGCACCATGCCAA
 A C G T A C T G A G T C A G T C C G T A A C T G G T A C C G T A T G C A A T G C G T A C G T A C G T C A C A G T
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A