Information for 12-AGAAAGGTAAACA (Motif 20)

C G T A A C T G C G T A C G T A C T G A C T A G A C T G A C G T C G T A C G T A C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C G T A C G T C G T A A G T C A G T C G A C T A C G T G C A T A G T C A C G T
p-value:1e-11
log p-value:-2.580e+01
Information Content per bp:1.936
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets75.6 +/- 18.2bp
Average Position of motif in Background81.0 +/- 8.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXF2/MA0030.1/Jaspar

Match Rank:1
Score:0.81
Offset:1
Orientation:forward strand
Alignment:AGAAAGGTAAACA--
-CAAACGTAAACAAT
 C G T A A C T G C G T A C G T A C T G A C T A G A C T G A C G T C G T A C G T A C G T A A G T C C G T A A C G T A C G T
A C G T A G T C G T C A G C T A C G T A T A G C C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A C G A T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.76
Offset:3
Orientation:forward strand
Alignment:AGAAAGGTAAACA
---AAAGTAAACA
 C G T A A C T G C G T A C G T A C T G A C T A G A C T G A C G T C G T A C G T A C G T A A G T C C G T A
A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

Foxk1/MA0852.1/Jaspar

Match Rank:3
Score:0.76
Offset:1
Orientation:forward strand
Alignment:AGAAAGGTAAACA-----
-AAAATGTAAACAAACAG
 C G T A A C T G C G T A C G T A C T G A C T A G A C T G A C G T C G T A C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0018.1_Foxk1_1/Jaspar

Match Rank:4
Score:0.76
Offset:1
Orientation:forward strand
Alignment:AGAAAGGTAAACA-----
-AAAATGTAAACAAACAG
 C G T A A C T G C G T A C G T A C T G A C T A G A C T G A C G T C G T A C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

Foxj3/MA0851.1/Jaspar

Match Rank:5
Score:0.76
Offset:1
Orientation:forward strand
Alignment:AGAAAGGTAAACA-----
-AAAAAGTAAACAAACAC
 C G T A A C T G C G T A C G T A C T G A C T A G A C T G A C G T C G T A C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0017.1_Foxj3_1/Jaspar

Match Rank:6
Score:0.76
Offset:1
Orientation:forward strand
Alignment:AGAAAGGTAAACA-----
-AAAAAGTAAACAAACAC
 C G T A A C T G C G T A C G T A C T G A C T A G A C T G A C G T C G T A C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:7
Score:0.76
Offset:4
Orientation:reverse strand
Alignment:AGAAAGGTAAACA---
----NDGTAAACARRN
 C G T A A C T G C G T A C G T A C T G A C T A G A C T G A C G T C G T A C G T A C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C T A G T C A G A C G T C G T A C G T A C G T A A G T C C G T A T C A G T C A G C T G A

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:8
Score:0.76
Offset:5
Orientation:forward strand
Alignment:AGAAAGGTAAACA
-----DGTAAACA
 C G T A A C T G C G T A C G T A C T G A C T A G A C T G A C G T C G T A C G T A C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A

FOXI1/MA0042.2/Jaspar

Match Rank:9
Score:0.76
Offset:6
Orientation:forward strand
Alignment:AGAAAGGTAAACA
------GTAAACA
 C G T A A C T G C G T A C G T A C T G A C T A G A C T G A C G T C G T A C G T A C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T T C A G G C A T T G C A G T C A C G T A G A T C T C G A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:10
Score:0.76
Offset:3
Orientation:forward strand
Alignment:AGAAAGGTAAACA
---AAAGTAAACA
 C G T A A C T G C G T A C G T A C T G A C T A G A C T G A C G T C G T A C G T A C G T A A G T C C G T A
A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A