Information for 7-STKTGTTARTRGC (Motif 13)

T A C G G A C T A C T G A G C T A C T G G A C T A G C T G C T A C T G A G A C T T C A G C A T G G T A C
Reverse Opposite:
C A T G G A T C A G T C C T G A G A C T C A G T C T G A C T G A G T A C C T G A T G A C C T G A A T G C
p-value:1e-13
log p-value:-3.144e+01
Information Content per bp:1.629
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.92%
Number of Background Sequences with motif144.1
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets53.6 +/- 22.1bp
Average Position of motif in Background47.3 +/- 34.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0119.1_Foxa2_2/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--STKTGTTARTRGC
NCNTTTGTTATTTNN
 A C G T A C G T T A C G G A C T A C T G A G C T A C T G G A C T A G C T G C T A C T G A G A C T T C A G C A T G G T A C
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

PB0109.1_Bbx_2/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-STKTGTTARTRGC---
TGATTGTTAACAGTTGG
 A C G T T A C G G A C T A C T G A G C T A C T G G A C T A G C T G C T A C T G A G A C T T C A G C A T G G T A C A C G T A C G T A C G T
G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G

PB0071.1_Sox4_1/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----STKTGTTARTRGC
TNNTCCTTTGTTCTNNT-
 A C G T A C G T A C G T A C G T A C G T T A C G G A C T A C T G A G C T A C T G G A C T A G C T G C T A C T G A G A C T T C A G C A T G G T A C
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-STKTGTTARTRGC
AAGGTGTKAA----
 A C G T T A C G G A C T A C T G A G C T A C T G G A C T A G C T G C T A C T G A G A C T T C A G C A T G G T A C
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:STKTGTTARTRGC
-ATTGTT------
 T A C G G A C T A C T G A G C T A C T G G A C T A G C T G C T A C T G A G A C T T C A G C A T G G T A C
A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PH0063.1_Hoxb8/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:STKTGTTARTRGC----
-TTTATTAATTGCNNGN
 T A C G G A C T A C T G A G C T A C T G G A C T A G C T G C T A C T G A G A C T T C A G C A T G G T A C A C G T A C G T A C G T A C G T
A C G T G C A T G A C T A C G T C T G A C G A T G C A T C G T A C G T A A C G T C A G T C T A G G A T C G T A C T C A G A T C G C G A T

PB0061.1_Sox11_1/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----STKTGTTARTRGC
NNNTCCTTTGTTCTNNN-
 A C G T A C G T A C G T A C G T A C G T T A C G G A C T A C T G A G C T A C T G G A C T A G C T G C T A C T G A G A C T T C A G C A T G G T A C
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:STKTGTTARTRGC
AGGTGTTAAT---
 T A C G G A C T A C T G A G C T A C T G G A C T A G C T G C T A C T G A G A C T T C A G C A T G G T A C
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---STKTGTTARTRGC
NNNNTTTGTTTACNNT
 A C G T A C G T A C G T T A C G G A C T A C T G A G C T A C T G G A C T A G C T G C T A C T G A G A C T T C A G C A T G G T A C
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

SRY/MA0084.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:STKTGTTARTRGC
-ATTGTTTAN---
 T A C G G A C T A C T G A G C T A C T G G A C T A G C T G C T A C T G A G A C T T C A G C A T G G T A C
A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C A C G T A C G T A C G T