Information for 8-GGTCACAGACCMGGTC (Motif 11)

A C T G A C T G A G C T T A G C C G T A G T A C C T G A T C A G C T G A A G T C G A T C G T C A A C T G A C T G A C G T A G T C
Reverse Opposite:
A C T G T G C A A G T C T G A C A C G T C A T G C T A G A G C T A G T C A G C T A C T G G A C T A T C G C T G A T A G C A G T C
p-value:1e-13
log p-value:-3.179e+01
Information Content per bp:1.719
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.3 +/- 28.5bp
Average Position of motif in Background75.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGTCACAGACCMGGTC
AGGTGHCAGACA-----
 A C G T A C T G A C T G A G C T T A G C C G T A G T A C C T G A T C A G C T G A A G T C G A T C G T C A A C T G A C T G A C G T A G T C
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGTCACAGACCMGGTC
AGGTGNCAGACAG----
 A C G T A C T G A C T G A G C T T A G C C G T A G T A C C T G A T C A G C T G A A G T C G A T C G T C A A C T G A C T G A C G T A G T C
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T A C G T A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGTCACAGACCMGGTC
GGGGTCAAAGTCCAAT--
 A C G T A C G T A C T G A C T G A G C T T A G C C G T A G T A C C T G A T C A G C T G A A G T C G A T C G T C A A C T G A C T G A C G T A G T C
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGTCACAGACCMGGTC
VBTGWCAGCB------
 A C T G A C T G A G C T T A G C C G T A G T A C C T G A T C A G C T G A A G T C G A T C G T C A A C T G A C T G A C G T A G T C
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:5
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GGTCACAGACCMGGTC
GGTGYTGACAGS-------
 A C G T A C G T A C G T A C T G A C T G A G C T T A G C C G T A G T A C C T G A T C A G C T G A A G T C G A T C G T C A A C T G A C T G A C G T A G T C
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GGTCACAGACCMGGTC--
----ACATGCCCGGGCAT
 A C T G A C T G A G C T T A G C C G T A G T A C C T G A T C A G C T G A A G T C G A T C G T C A A C T G A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GGTCACAGACCMGGTC
GAGGTCAAAGGTCA----
 A C G T A C G T A C T G A C T G A G C T T A G C C G T A G T A C C T G A T C A G C T G A A G T C G A T C G T C A A C T G A C T G A C G T A G T C
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A A C G T A C G T A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:8
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GGTCACAGACCMGGTC
NAGGTCANTGACCT----
 A C G T A C G T A C T G A C T G A G C T T A G C C G T A G T A C C T G A T C A G C T G A A G T C G A T C G T C A A C T G A C T G A C G T A G T C
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T A C G T A C G T A C G T A C G T

Rxra/MA0512.2/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GGTCACAGACCMGGTC
GGGGTCAAAGGTCA----
 A C G T A C G T A C T G A C T G A G C T T A G C C G T A G T A C C T G A T C A G C T G A A G T C G A T C G T C A A C T G A C T G A C G T A G T C
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A A C G T A C G T A C G T A C G T

RXRG/MA0856.1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GGTCACAGACCMGGTC
GGGGTCAAAGGTCA----
 A C G T A C G T A C T G A C T G A G C T T A G C C G T A G T A C C T G A T C A G C T G A A G T C G A T C G T C A A C T G A C T G A C G T A G T C
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A A C G T A C G T A C G T A C G T