Information for 7-TGTCTCTGHTTTAATA (Motif 10)

A C G T A C T G A G C T A T G C A C G T A G T C A C G T A T C G G A C T A G C T A C G T C A G T C T G A C G T A C G A T C G T A
Reverse Opposite:
A C G T C G T A C G A T A G C T G T C A C G T A C T G A C G T A A T G C C G T A C T A G G T C A A T C G C T G A A G T C G T C A
p-value:1e-14
log p-value:-3.318e+01
Information Content per bp:1.754
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.8 +/- 24.0bp
Average Position of motif in Background56.5 +/- 14.6bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0123.1_Foxl1_2/Jaspar

Match Rank:1
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TGTCTCTGHTTTAATA-
-NNTTTTGTTTTGATNT
 A C G T A C T G A G C T A T G C A C G T A G T C A C G T A T C G G A C T A G C T A C G T C A G T C T G A C G T A C G A T C G T A A C G T
A C G T C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

Arid3a/MA0151.1/Jaspar

Match Rank:2
Score:0.51
Offset:9
Orientation:reverse strand
Alignment:TGTCTCTGHTTTAATA
---------TTTAAT-
 A C G T A C T G A G C T A T G C A C G T A G T C A C G T A T C G G A C T A G C T A C G T C A G T C T G A C G T A C G A T C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T

PB0129.1_Glis2_2/Jaspar

Match Rank:3
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:TGTCTCTGHTTTAATA--
----TCTTTANTAATANN
 A C G T A C T G A G C T A T G C A C G T A G T C A C G T A T C G G A C T A G C T A C G T C A G T C T G A C G T A C G A T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T

Gfi1/MA0038.1/Jaspar

Match Rank:4
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:TGTCTCTGHTTTAATA
---CNGTGATTTN---
 A C G T A C T G A G C T A T G C A C G T A G T C A C G T A T C G G A C T A G C T A C G T C A G T C T G A C G T A C G A T C G T A
A C G T A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:5
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:TGTCTCTGHTTTAATA-
--NNNNNNCTTTTATAN
 A C G T A C T G A G C T A T G C A C G T A G T C A C G T A T C G G A C T A G C T A C G T C A G T C T G A C G T A C G A T C G T A A C G T
A C G T A C G T A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

TBP/MA0108.2/Jaspar

Match Rank:6
Score:0.48
Offset:2
Orientation:reverse strand
Alignment:TGTCTCTGHTTTAATA-
--NNNNNNCTTTTATAN
 A C G T A C T G A G C T A T G C A C G T A G T C A C G T A T C G G A C T A G C T A C G T C A G T C T G A C G T A C G A T C G T A A C G T
A C G T A C G T A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.48
Offset:2
Orientation:forward strand
Alignment:TGTCTCTGHTTTAATA
--CCTTTGTTTT----
 A C G T A C T G A G C T A T G C A C G T A G T C A C G T A T C G G A C T A G C T A C G T C A G T C T G A C G T A C G A T C G T A
A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T A C G T

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--TGTCTCTGHTTTAATA--
NNTGTTCTTTTTTGTTTACT
 A C G T A C G T A C G T A C T G A G C T A T G C A C G T A G T C A C G T A T C G G A C T A G C T A C G T C A G T C T G A C G T A C G A T C G T A A C G T A C G T
G C A T G C T A C G A T A T C G G C A T C G A T G A T C G A C T G C A T A G C T A G C T A G C T G C A T T C A G A C G T A C G T A C G T C T G A G A T C G C A T

GATA1::TAL1/MA0140.2/Jaspar

Match Rank:9
Score:0.47
Offset:-1
Orientation:reverse strand
Alignment:-TGTCTCTGHTTTAATA-
CTGNNNNNNNCAGATAAG
 A C G T A C G T A C T G A G C T A T G C A C G T A G T C A C G T A T C G G A C T A G C T A C G T C A G T C T G A C G T A C G A T C G T A A C G T
T A G C C G A T A C T G A G T C C G A T A G T C A T G C C A G T A G T C T G C A T A G C C G T A A C T G C G T A A C G T C G T A C T G A A C T G

PB0148.1_Mtf1_2/Jaspar

Match Rank:10
Score:0.47
Offset:5
Orientation:reverse strand
Alignment:TGTCTCTGHTTTAATA---
-----NNTTTTTCTTATNT
 A C G T A C T G A G C T A T G C A C G T A G T C A C G T A T C G G A C T A G C T A C G T C A G T C T G A C G T A C G A T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T