Information for 1-AGGTGTKAAWTDN (Motif 1)

C T G A C T A G A T C G C G A T A C T G G C A T A C T G C T G A T C G A C G A T A C G T C T G A A T C G
Reverse Opposite:
T A G C G A C T T G C A G C T A A G C T A G C T T G A C C G T A A G T C G C T A A T G C G A T C G A C T
p-value:1e-122
log p-value:-2.821e+02
Information Content per bp:1.593
Number of Target Sequences with motif229.0
Percentage of Target Sequences with motif31.89%
Number of Background Sequences with motif2193.0
Percentage of Background Sequences with motif4.60%
Average Position of motif in Targets53.6 +/- 19.9bp
Average Position of motif in Background49.7 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:1
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:AGGTGTKAAWTDN
AGGTGTTAAT---
 C T G A C T A G A T C G C G A T A C T G G C A T A C T G C T G A T C G A C G A T A C G T C T G A A T C G
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:2
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-AGGTGTKAAWTDN
AAGGTGTGAAA---
 A C G T C T G A C T A G A T C G C G A T A C T G G C A T A C T G C T G A T C G A C G A T A C G T C T G A A T C G
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:3
Score:0.94
Offset:0
Orientation:forward strand
Alignment:AGGTGTKAAWTDN
AGGTGTGAAA---
 C T G A C T A G A T C G C G A T A C T G G C A T A C T G C T G A T C G A C G A T A C G T C T G A A T C G
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:4
Score:0.94
Offset:0
Orientation:forward strand
Alignment:AGGTGTKAAWTDN
AGGTGTGAAM---
 C T G A C T A G A T C G C G A T A C T G G C A T A C T G C T G A T C G A C G A T A C G T C T G A A T C G
C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:5
Score:0.92
Offset:-1
Orientation:forward strand
Alignment:-AGGTGTKAAWTDN
AAGGTGTKAA----
 A C G T C T G A C T A G A T C G C G A T A C T G G C A T A C T G C T G A T C G A C G A T A C G T C T G A A T C G
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:6
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-AGGTGTKAAWTDN
AAGGTGTGAAAAT-
 A C G T C T G A C T A G A T C G C G A T A C T G G C A T A C T G C T G A T C G A C G A T A C G T C T G A A T C G
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:7
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-AGGTGTKAAWTDN
AAGGTGTGAA----
 A C G T C T G A C T A G A T C G C G A T A C T G G C A T A C T G C T G A T C G A C G A T A C G T C T G A A T C G
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:8
Score:0.91
Offset:0
Orientation:forward strand
Alignment:AGGTGTKAAWTDN
AGGTGTGA-----
 C T G A C T A G A T C G C G A T A C T G G C A T A C T G C T G A T C G A C G A T A C G T C T G A A T C G
C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:9
Score:0.90
Offset:0
Orientation:forward strand
Alignment:AGGTGTKAAWTDN
AGGTGTGA-----
 C T G A C T A G A T C G C G A T A C T G G C A T A C T G C T G A T C G A C G A T A C G T C T G A A T C G
C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:10
Score:0.90
Offset:-4
Orientation:forward strand
Alignment:----AGGTGTKAAWTDN
GAAAAGGTGTGAAAATT
 A C G T A C G T A C G T A C G T C T G A C T A G A T C G C G A T A C T G G C A T A C T G C T G A T C G A C G A T A C G T C T G A A T C G
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T