Information for 7-RTGACTCATB (Motif 5)

T C A G C A G T A C T G C G T A A T G C C G A T A G T C C G T A A G C T A G C T
Reverse Opposite:
T C G A T C G A C G A T A C T G C G T A A T C G A C G T T G A C G T C A A G T C
p-value:1e-21
log p-value:-5.054e+01
Information Content per bp:1.706
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif6.20%
Number of Background Sequences with motif456.8
Percentage of Background Sequences with motif0.96%
Average Position of motif in Targets50.6 +/- 25.6bp
Average Position of motif in Background48.0 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.98
Offset:0
Orientation:forward strand
Alignment:RTGACTCATB
ATGACTCATC
 T C A G C A G T A C T G C G T A A T G C C G A T A G T C C G T A A G C T A G C T
T C G A A C G T C A T G G C T A T A G C C G A T G T A C G C T A A C G T A T G C

Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer

Match Rank:2
Score:0.98
Offset:-1
Orientation:forward strand
Alignment:-RTGACTCATB-
DATGASTCATHN
 A C G T T C A G C A G T A C T G C G T A A T G C C G A T A G T C C G T A A G C T A G C T A C G T
C T A G T C G A A C G T A C T G C G T A A T G C A C G T G T A C C G T A A G C T G A T C G T A C

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.98
Offset:-1
Orientation:forward strand
Alignment:-RTGACTCATB-
NATGACTCATNN
 A C G T T C A G C A G T A C T G C G T A A T G C C G A T A G T C C G T A A G C T A G C T A C G T
C T A G T C G A A C G T A C T G C G T A T A G C C G A T G T A C C G T A A G C T G A T C G T A C

JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer

Match Rank:4
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:RTGACTCATB
ATGASTCATY
 T C A G C A G T A C T G C G T A A T G C C G A T A G T C C G T A A G C T A G C T
T C G A G A C T C A T G G C T A A T C G C G A T G T A C C G T A A G C T G A T C

Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer

Match Rank:5
Score:0.97
Offset:-2
Orientation:reverse strand
Alignment:--RTGACTCATB
NNVTGASTCATN
 A C G T A C G T T C A G C A G T A C T G C G T A A T G C C G A T A G T C C G T A A G C T A G C T
A T C G C T A G T G C A C G A T A C T G C T G A A T G C G C A T T G A C G C T A A G C T G A T C

Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer

Match Rank:6
Score:0.97
Offset:-2
Orientation:forward strand
Alignment:--RTGACTCATB
GGATGACTCATC
 A C G T A C G T T C A G C A G T A C T G C G T A A T G C C G A T A G T C C G T A A G C T A G C T
C A T G C T A G T C G A A C G T A C T G C G T A T A G C C G A T T G A C C G T A A G C T G A T C

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:7
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:RTGACTCATB
ATGASTCATH
 T C A G C A G T A C T G C G T A A T G C C G A T A G T C C G T A A G C T A G C T
T G C A A C G T A C T G C G T A T A G C C G A T G T A C C G T A A C G T G T C A

JUNB/MA0490.1/Jaspar

Match Rank:8
Score:0.97
Offset:-2
Orientation:forward strand
Alignment:--RTGACTCATB
GGATGACTCAT-
 A C G T A C G T T C A G C A G T A C T G C G T A A T G C C G A T A G T C C G T A A G C T A G C T
C A T G C T A G T C G A A C G T A C T G C G T A A T G C A C G T G T A C C G T A A C G T A C G T

FOSL2/MA0478.1/Jaspar

Match Rank:9
Score:0.97
Offset:-2
Orientation:forward strand
Alignment:--RTGACTCATB
GGATGACTCAT-
 A C G T A C G T T C A G C A G T A C T G C G T A A T G C C G A T A G T C C G T A A G C T A G C T
A C T G T C A G C T G A A C G T A C T G T C G A A T G C A C G T G T A C C G T A A C G T A C G T

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:10
Score:0.97
Offset:-1
Orientation:reverse strand
Alignment:-RTGACTCATB-
DATGASTCATNN
 A C G T T C A G C A G T A C T G C G T A A T G C C G A T A G T C C G T A A G C T A G C T A C G T
C A T G T C G A C G A T C A T G G C T A T A G C C G A T G T A C G C T A A G C T G A T C T G A C