Information for 18-ACACTTTGCA (Motif 36)

T C G A A G T C C T G A A T G C C G A T A C G T A G C T A C T G G A T C T C G A
Reverse Opposite:
A G C T C T A G G T A C C T G A C G T A C G T A A T C G A G C T C T A G A G C T
p-value:1e-5
log p-value:-1.286e+01
Information Content per bp:1.784
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.62%
Number of Background Sequences with motif137.6
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets55.2 +/- 28.3bp
Average Position of motif in Background46.4 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ACACTTTGCA
MRSCACTYAA--
 A C G T A C G T T C G A A G T C C T G A A T G C C G A T A C G T A G C T A C T G G A T C T C G A
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ACACTTTGCA
ACCACTTAA--
 A C G T T C G A A G T C C T G A A T G C C G A T A C G T A G C T A C T G G A T C T C G A
T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:ACACTTTGCA--
--NNTTGGCANN
 T C G A A G T C C T G A A T G C C G A T A C G T A G C T A C T G G A T C T C G A A C G T A C G T
A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

ISL2/MA0914.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ACACTTTGCA
GCACTTAA--
 T C G A A G T C C T G A A T G C C G A T A C G T A G C T A C T G G A T C T C G A
T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ACACTTTGCA
ACCACTTGAA-
 A C G T T C G A A G T C C T G A A T G C C G A T A C G T A G C T A C T G G A T C T C G A
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ACACTTTGCA
ACCACTTAA--
 A C G T T C G A A G T C C T G A A T G C C G A T A C G T A G C T A C T G G A T C T C G A
T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ACACTTTGCA
TCACACCT----
 A C G T A C G T T C G A A G T C C T G A A T G C C G A T A C G T A G C T A C T G G A T C T C G A
G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T A C G T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----ACACTTTGCA
KTTCACACCT----
 A C G T A C G T A C G T A C G T T C G A A G T C C T G A A T G C C G A T A C G T A G C T A C T G G A T C T C G A
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T A C G T A C G T A C G T

Creb3l2/MA0608.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ACACTTTGCA
ACACGTGGC-
 T C G A A G T C C T G A A T G C C G A T A C G T A G C T A C T G G A T C T C G A
G C T A A T G C C G T A A G T C A C T G A C G T A T C G C A T G G T A C A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ACACTTTGCA
TGACACCT----
 A C G T A C G T T C G A A G T C C T G A A T G C C G A T A C G T A G C T A C T G G A T C T C G A
G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T