Information for 23-TVCTGGTGCTTTTTTG (Motif 30)

A C G T T A C G A G T C A C G T A C T G A T C G A C G T A C T G G T A C A C G T C G A T C G A T C G A T A C G T A C G T C A T G
Reverse Opposite:
G T A C C G T A C G T A C G T A C G T A C G T A G T C A A C T G A G T C C G T A A T G C A G T C C G T A A C T G A G T C C G T A
p-value:1e-9
log p-value:-2.215e+01
Information Content per bp:1.812
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.2 +/- 13.6bp
Average Position of motif in Background36.2 +/- 4.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TVCTGGTGCTTTTTTG--
---CCTTGCAATTTTTNN
 A C G T T A C G A G T C A C G T A C T G A T C G A C G T A C T G G T A C A C G T C G A T C G A T C G A T A C G T A C G T C A T G A C G T A C G T
A C G T A C G T A C G T A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TVCTGGTGCTTTTTTG
TNTCCTGCTGTGNNG---
 A C G T A C G T A C G T T A C G A G T C A C G T A C T G A T C G A C G T A C T G G T A C A C G T C G A T C G A T C G A T A C G T A C G T C A T G
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TVCTGGTGCTTTTTTG
NNTCCTGCTGTGNNN---
 A C G T A C G T A C G T T A C G A G T C A C G T A C T G A T C G A C G T A C T G G T A C A C G T C G A T C G A T C G A T A C G T A C G T C A T G
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TVCTGGTGCTTTTTTG
NNCAGGTGCG------
 A C G T T A C G A G T C A C G T A C T G A T C G A C G T A C T G G T A C A C G T C G A T C G A T C G A T A C G T A C G T C A T G
G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TVCTGGTGCTTTTTTG
TCNCCTGCTGNGNNN---
 A C G T A C G T A C G T T A C G A G T C A C G T A C T G A T C G A C G T A C T G G T A C A C G T C G A T C G A T C G A T A C G T A C G T C A T G
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TVCTGGTGCTTTTTTG
NNCAGGTGTN------
 A C G T T A C G A G T C A C G T A C T G A T C G A C G T A C T G G T A C A C G T C G A T C G A T C G A T A C G T A C G T C A T G
G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T A C G T A C G T A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TVCTGGTGCTTTTTTG
ACATCCTGNT---------
 A C G T A C G T A C G T A C G T T A C G A G T C A C G T A C T G A T C G A C G T A C T G G T A C A C G T C G A T C G A T C G A T A C G T A C G T C A T G
C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TVCTGGTGCTTTTTTG
CCCCCTGCTGTG------
 A C G T A C G T A C G T T A C G A G T C A C G T A C T G A T C G A C G T A C T G G T A C A C G T C G A T C G A T C G A T A C G T A C G T C A T G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:9
Score:0.53
Offset:-8
Orientation:forward strand
Alignment:--------TVCTGGTGCTTTTTTG
ACTYKNATTCGTGNTACTTC----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A G T C A C G T A C T G A T C G A C G T A C T G G T A C A C G T C G A T C G A T C G A T A C G T A C G T C A T G
C T G A G T A C G A C T A G T C C A G T T G C A C T G A A C G T A G C T G A T C C T A G C G A T A C T G A T G C G A C T C T G A G A T C G A C T A G C T G A T C A C G T A C G T A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TVCTGGTGCTTTTTTG
ATCCACAGGTGCGAAAA--
 A C G T A C G T A C G T A C G T T A C G A G T C A C G T A C T G A T C G A C G T A C T G G T A C A C G T C G A T C G A T C G A T A C G T A C G T C A T G
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A A C G T A C G T