Information for 13-CAGCTHGHTG (Motif 28)

A G T C C G T A A C T G A G T C A C G T G A T C A C T G G A C T A C G T A T C G
Reverse Opposite:
A T G C C G T A C T G A T G A C C T A G C G T A A C T G A G T C A C G T A C T G
p-value:1e-9
log p-value:-2.269e+01
Information Content per bp:1.815
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.89%
Number of Background Sequences with motif84.4
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets49.1 +/- 26.5bp
Average Position of motif in Background53.3 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CAGCTHGHTG
HCAGCTGDTN-
 A C G T A G T C C G T A A C T G A G T C A C G T G A T C A C T G G A C T A C G T A T C G
G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:2
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---CAGCTHGHTG
NAACAGCTGG---
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C G T G A T C A C T G G A C T A C G T A T C G
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CAGCTHGHTG
GCAGCTGTNN-
 A C G T A G T C C G T A A C T G A G T C A C G T G A T C A C T G G A C T A C G T A T C G
T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CAGCTHGHTG
CAGCTGTT--
 A G T C C G T A A C T G A G T C A C G T G A T C A C T G G A C T A C G T A T C G
A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTHGHTG
CAGCAGCTGN---
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C G T G A T C A C T G G A C T A C G T A T C G
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CAGCTHGHTG
CAGCC-----
 A G T C C G T A A C T G A G T C A C G T G A T C A C T G G A C T A C G T A T C G
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CAGCTHGHTG
ACAGCTGTTN-
 A C G T A G T C C G T A A C T G A G T C A C G T G A T C A C T G G A C T A C G T A T C G
T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:8
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----CAGCTHGHTG
NNAGCAGCTGCT--
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C G T G A T C A C T G G A C T A C G T A T C G
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:9
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTHGHTG
NNGCAGCTGTT--
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C G T G A T C A C T G G A C T A C G T A T C G
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:10
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTHGHTG
NNGCAGCTGTC--
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C G T G A T C A C T G G A C T A C G T A T C G
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T