p-value: | 1e-11 |
log p-value: | -2.560e+01 |
Information Content per bp: | 1.914 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.67% |
Number of Background Sequences with motif | 1.4 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 40.2 +/- 18.2bp |
Average Position of motif in Background | 68.4 +/- 12.5bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
Match Rank: | 1 |
Score: | 0.62 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TTGTTTGTCACTTAGC -TGTCTGDCACCT--- |
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SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar
Match Rank: | 2 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TTGTTTGTCACTTAGC CTGTCTGTCACCT--- |
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Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer
Match Rank: | 3 |
Score: | 0.57 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | TTGTTTGTCACTTAGC -------BCMATTAG- |
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Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer
Match Rank: | 4 |
Score: | 0.56 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TTGTTTGTCACTTAGC ---KTTCACACCT--- |
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NKX3-2/MA0122.2/Jaspar
Match Rank: | 5 |
Score: | 0.56 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | TTGTTTGTCACTTAGC ------ACCACTTAA- |
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ISL2/MA0914.1/Jaspar
Match Rank: | 6 |
Score: | 0.56 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | TTGTTTGTCACTTAGC -------GCACTTAA- |
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Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer
Match Rank: | 7 |
Score: | 0.55 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | TTGTTTGTCACTTAGC -----TGTCANYT--- |
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PB0108.1_Atf1_2/Jaspar
Match Rank: | 8 |
Score: | 0.54 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TTGTTTGTCACTTAGC NTTATTCGTCATNC--- |
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Nkx3-1/MA0124.2/Jaspar
Match Rank: | 9 |
Score: | 0.54 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | TTGTTTGTCACTTAGC ------ACCACTTAA- |
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PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer
Match Rank: | 10 |
Score: | 0.54 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TTGTTTGTCACTTAGC --GSCTGTCACTCA-- |
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