Information for 11-AACAGCAGGGAGC (Motif 13)

C G T A C T G A A T G C C G T A A T C G A T G C C G T A A C T G C T A G T A C G C T G A A C T G A T G C
Reverse Opposite:
A T C G A G T C A G C T A T G C A G T C A G T C A C G T A T C G A T G C C G A T A T C G A G C T A C G T
p-value:1e-14
log p-value:-3.378e+01
Information Content per bp:1.800
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.75%
Number of Background Sequences with motif28.6
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets57.6 +/- 23.1bp
Average Position of motif in Background48.5 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)2.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:AACAGCAGGGAGC
CACAGCAGGGGG-
C G T A C T G A A T G C C G T A A T C G A T G C C G T A A C T G C T A G T A C G C T G A A C T G A T G C
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AACAGCAGGGAGC-
DCHCAGCAGGRGGCC
A C G T C G T A C T G A A T G C C G T A A T C G A T G C C G T A A C T G C T A G T A C G C T G A A C T G A T G C A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

ZIC1/MA0696.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AACAGCAGGGAGC-
CACAGCGGGGGGTC
C G T A C T G A A T G C C G T A A T C G A T G C C G T A A C T G C T A G T A C G C T G A A C T G A T G C A C G T
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

ZIC4/MA0751.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AACAGCAGGGAGC-
NCNCAGCGGGGGGTC
A C G T C G T A C T G A A T G C C G T A A T C G A T G C C G T A A C T G C T A G T A C G C T G A A C T G A T G C A C G T
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AACAGCAGGGAGC-------
GCCASCAGGGGGCGCYVNNG
C G T A C T G A A T G C C G T A A T C G A T G C C G T A A C T G C T A G T A C G C T G A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AACAGCAGGGAGC
DCTCAGCAGG----
A C G T C G T A C T G A A T G C C G T A A T C G A T G C C G T A A C T G C T A G T A C G C T G A A C T G A T G C
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.61
Offset:3
Orientation:forward strand
Alignment:AACAGCAGGGAGC
---ANCAGGAAGT
C G T A C T G A A T G C C G T A A T C G A T G C C G T A A C T G C T A G T A C G C T G A A C T G A T G C
A C G T A C G T A C G T C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T

ZIC3/MA0697.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AACAGCAGGGAGC-
NCGCAGCGGGGGGTC
A C G T C G T A C T G A A T G C C G T A A T C G A T G C C G T A A C T G C T A G T A C G C T G A A C T G A T G C A C G T
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AACAGCAGGGAGC
NAACAGCTGG----
A C G T C G T A C T G A A T G C C G T A A T C G A T G C C G T A A C T G C T A G T A C G C T G A A C T G A T G C
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AACAGCAGGGAGC
CCACACAGCAGGAGA-
A C G T A C G T A C G T C G T A C T G A A T G C C G T A A T C G A T G C C G T A A C T G C T A G T A C G C T G A A C T G A T G C
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T