Information for 8-TTMWTGYTATKTC (Motif 6)

A C G T A C G T G T A C C G A T A C G T A C T G A G C T A C G T C G T A A C G T A C G T C G A T A G T C
Reverse Opposite:
A C T G C G T A G T C A C G T A A C G T C G T A C T G A A G T C C G T A C G T A A C T G C G T A G T C A
p-value:1e-13
log p-value:-3.083e+01
Information Content per bp:1.875
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.5 +/- 32.1bp
Average Position of motif in Background67.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0119.1_Foxa2_2/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TTMWTGYTATKTC-
NCNTTTGTTATTTNN
 A C G T A C G T A C G T G T A C C G A T A C G T A C T G A G C T A C G T C G T A A C G T A C G T C G A T A G T C A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

PB0093.1_Zfp105_1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTMWTGYTATKTC--
NTNTTGTTGTTTGTN
 A C G T A C G T G T A C C G A T A C G T A C T G A G C T A C G T C G T A A C G T A C G T C G A T A G T C A C G T A C G T
G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T

PB0120.1_Foxj1_2/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTMWTGYTATKTC--
GTNTTGTTGTGANNT
 A C G T A C G T G T A C C G A T A C G T A C T G A G C T A C G T C G T A A C G T A C G T C G A T A G T C A C G T A C G T
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

PB0148.1_Mtf1_2/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTMWTGYTATKTC
NNTTTTTCTTATNT-
 A C G T A C G T A C G T A C G T G T A C C G A T A C G T A C T G A G C T A C G T C G T A A C G T A C G T C G A T A G T C
A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T A C G T

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:5
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------TTMWTGYTATKTC
ACTYKNATTCGTGNTACTTC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G A T A C G T A C T G A G C T A C G T C G T A A C G T A C G T C G A T A G T C
C T G A G T A C G A C T A G T C C A G T T G C A C T G A A C G T A G C T G A T C C T A G C G A T A C T G A T G C G A C T C T G A G A T C G A C T A G C T G A T C

PH0046.1_Hoxa10/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TTMWTGYTATKTC---
TNAATTTTATTACCTN
 A C G T A C G T G T A C C G A T A C G T A C T G A G C T A C G T C G T A A C G T A C G T C G A T A G T C A C G T A C G T A C G T
G C A T C A T G G T C A C G T A C G A T C G A T G C A T C G A T C G T A G A C T C A G T C T G A A G T C T G A C C A G T G T C A

PB0172.1_Sox1_2/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TTMWTGYTATKTC
CTATAATTGTTAGCG-
 A C G T A C G T A C G T A C G T A C G T G T A C C G A T A C G T A C T G A G C T A C G T C G T A A C G T A C G T C G A T A G T C
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TTMWTGYTATKTC-
TAATTGTTCTAAAC
 A C G T A C G T G T A C C G A T A C G T A C T G A G C T A C G T C G T A A C G T A C G T C G A T A G T C A C G T
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:TTMWTGYTATKTC----
-----KCTATTTTTRGH
 A C G T A C G T G T A C C G A T A C G T A C T G A G C T A C G T C G T A A C G T A C G T C G A T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

ONECUT3/MA0757.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TTMWTGYTATKTC
NTTATTGATTTTTT
 A C G T A C G T A C G T G T A C C G A T A C G T A C T G A G C T A C G T C G T A A C G T A C G T C G A T A G T C
C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T