Information for 7-GTAKSWGGCWCCA (Motif 5)

A T C G A C G T G T C A A C G T A T C G C G A T A C T G A C T G A G T C C G T A A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G C G A T A C T G A G T C A G T C C G T A A T G C G T C A A C G T G T C A A T G C
p-value:1e-13
log p-value:-3.198e+01
Information Content per bp:1.870
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.3 +/- 23.5bp
Average Position of motif in Background41.0 +/- 17.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F1/MA0024.3/Jaspar

Match Rank:1
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GTAKSWGGCWCCA--
---TTTGGCGCCAAA
 A T C G A C G T G T C A A C G T A T C G C G A T A C T G A C T G A G T C C G T A A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:GTAKSWGGCWCCA-----
------GGCTCYAKCAYC
 A T C G A C G T G T C A A C G T A T C G C G A T A C T G A C T G A G T C C G T A A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

PB0112.1_E2F2_2/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GTAKSWGGCWCCA-----
-CCTTCGGCGCCAAAAGG
 A T C G A C G T G T C A A C G T A T C G C G A T A C T G A C T G A G T C C G T A A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

PB0113.1_E2F3_2/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GTAKSWGGCWCCA-----
-AGCTCGGCGCCAAAAGC
 A T C G A C G T G T C A A C G T A T C G C G A T A C T G A C T G A G T C C G T A A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.53
Offset:7
Orientation:forward strand
Alignment:GTAKSWGGCWCCA
-------GCTCCG
 A T C G A C G T G T C A A C G T A T C G C G A T A C T G A C T G A G T C C G T A A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GTAKSWGGCWCCA
---NTTGGCANN-
 A T C G A C G T G T C A A C G T A T C G C G A T A C T G A C T G A G T C C G T A A G T C A G T C C G T A
A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----GTAKSWGGCWCCA---
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A T C G A C G T G T C A A C G T A T C G C G A T A C T G A C T G A G T C C G T A A G T C A G T C C G T A A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:8
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------GTAKSWGGCWCCA
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T G T C A A C G T A T C G C G A T A C T G A C T G A G T C C G T A A G T C A G T C C G T A
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

Hic1/MA0739.1/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GTAKSWGGCWCCA
--GGTTGGCAT--
 A T C G A C G T G T C A A C G T A T C G C G A T A C T G A C T G A G T C C G T A A G T C A G T C C G T A
A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.51
Offset:-6
Orientation:reverse strand
Alignment:------GTAKSWGGCWCCA-
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T G T C A A C G T A T C G C G A T A C T G A C T G A G T C C G T A A G T C A G T C C G T A A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T