Information for 6-GGAATTGCAC (Motif 7)

C T A G A C T G G T C A C G T A G A C T A C G T A C T G A G T C G T C A G T A C
Reverse Opposite:
A C T G A C G T A C T G T G A C C G T A C T G A A C G T A C G T A G T C A G T C
p-value:1e-9
log p-value:-2.098e+01
Information Content per bp:1.848
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.45%
Number of Background Sequences with motif58.1
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets53.3 +/- 23.7bp
Average Position of motif in Background47.6 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:1
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:GGAATTGCAC--
GGGATTGCATNN
 C T A G A C T G G T C A C G T A G A C T A C G T A C T G A G T C G T C A G T A C A C G T A C G T
T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.70
Offset:-11
Orientation:reverse strand
Alignment:-----------GGAATTGCAC
TGGCCANNNNNGGAACTGCA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G G T C A C G T A G A C T A C G T A C T G A G T C G T C A G T A C
G C A T C T A G C A T G G A T C G A T C C T G A G A T C G C A T A C T G A G C T C A G T C T A G C A T G G C T A C G T A A G T C C G A T C T A G A T G C G C T A A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GGAATTGCAC
GGAAATTCCC
 C T A G A C T G G T C A C G T A G A C T A C G T A C T G A G T C G T C A G T A C
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GGAATTGCAC
TGGAACAGMA-
 A C G T C T A G A C T G G T C A C G T A G A C T A C G T A C T G A G T C G T C A G T A C
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:5
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GGAATTGCAC--
GAAAAAATTGCAAGG
 A C G T A C G T A C G T C T A G A C T G G T C A C G T A G A C T A C G T A C T G A G T C G T C A G T A C A C G T A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

RELA/MA0107.1/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGAATTGCAC
GGAAATTCCC
 C T A G A C T G G T C A C G T A G A C T A C G T A C T G A G T C G T C A G T A C
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:7
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GGAATTGCAC-
GGGAAATCCCCN
 A C G T C T A G A C T G G T C A C G T A G A C T A C G T A C T G A G T C G T C A G T A C A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

REL/MA0101.1/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGAATTGCAC
GGAAANCCCC
 C T A G A C T G G T C A C G T A G A C T A C G T A C T G A G T C G T C A G T A C
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGAATTGCAC-
CGGAAGTGAAAC
 A C G T C T A G A C T G G T C A C G T A G A C T A C G T A C T G A G T C G T C A G T A C A C G T
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:10
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GGAATTGCAC
AAAGRGGAAGTG---
 A C G T A C G T A C G T A C G T A C G T C T A G A C T G G T C A C G T A G A C T A C G T A C T G A G T C G T C A G T A C
C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G A C G T A C G T A C G T